Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02380 |
Symbol | |
ID | 6777834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2566458 |
End bp | 2567495 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642755819 |
Product | ISCps1, transposase |
Protein accession | YP_002126670 |
Protein GI | 196157181 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.274494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAATA TAATCACAGG TGTTGATTTA GCGAAAGAAG AAATTCAGGT TTGCGTTTGT AAACGCAACA AGGTGCAGTC TAATCAGGCG ATGACACCGA TAGAATTTGG TTCTTGGCTA GCGTCGTCAA AACCAATGAC AATTGTTTTT GAAGCATGTA GTACATCAAA CTACTGGAAG CAAAAAGCGT TGGAATATGG GCATGATGCT CGATTAATTT CAGCAAAATT GGTTGCTAGT GTTAGGCAAA ATCAGAAAAC AGATAAAAAC GACGCCTTAG CGGTTGCGCA AGCTGCTCAA CTCACCGATG TTTCGTTTAT TAACGGCAAA TCAAAAGAGC AGCAAGAGCT ACAAACCTTG GTTCGTCTGC GAGAGTTGGC CGTTAAGCAT AAAGTCGCAA TGCAGCAACA AATTAAATCT TTATTGCTAG AGTTTAATAT CCGAATCTCG CCTAGTCAGG GAGGGTTAAG TGGCGTTGTT GAAGGCGTAC TGGAAGATGC TGAAAATGGC TTTTCCATGG TTTTTAGGCA AGCTCTCAGT ACTAGCTGGC AACAACTCCA GCGTGGTATT GAGTCGATAA AGCAGTACGA TTTATATTTA GAAAAAGCAG CAAACGGCCA CGAAATATGT AAATCGCTAC AGGCCCTAGA AGGTGTAGGT CCGTTAAACG CTGTGAATCT TTATATGGCA CTGGGCTGTG GAGAGATGGG GCAATTTGAA AAAGGTCGCG ATGCATCTGC CTGTATTGGT TTAACGCCTA TTCAACATTC GTCGGGCGGT AAAGTAAAAT TGGGCTCGGT GGGCAAGTAC GTTAAAAATA ATATGCTACG AAGTTGCTTA GTTAGCGGTG CAATGTCAGC AGTTAATCAG GCGATGAGAC GACCAGCAAA AACCAAAAAA GAGATGTGGA TCCAGCAGAT GGTTGAACGC AGAGGTAAGC GCTGTACAGC GGTCGCGCTA GCAAATAAAA CAGTAAGAAC GGCATTCGCG ATGCTTACAA ATGGCACAGA ATACAAAGCA GAACTACTCG CTGCTTAA
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Protein sequence | MHNIITGVDL AKEEIQVCVC KRNKVQSNQA MTPIEFGSWL ASSKPMTIVF EACSTSNYWK QKALEYGHDA RLISAKLVAS VRQNQKTDKN DALAVAQAAQ LTDVSFINGK SKEQQELQTL VRLRELAVKH KVAMQQQIKS LLLEFNIRIS PSQGGLSGVV EGVLEDAENG FSMVFRQALS TSWQQLQRGI ESIKQYDLYL EKAANGHEIC KSLQALEGVG PLNAVNLYMA LGCGEMGQFE KGRDASACIG LTPIQHSSGG KVKLGSVGKY VKNNMLRSCL VSGAMSAVNQ AMRRPAKTKK EMWIQQMVER RGKRCTAVAL ANKTVRTAFA MLTNGTEYKA ELLAA
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