| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02372 |
|---|
| Symbol | |
|---|
| ID | 6777711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2559539 |
|---|
| End bp | 2560192 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642755811 |
|---|
| Product | adenylate/guanylate cyclase |
|---|
| Protein accession | YP_002126662 |
|---|
| Protein GI | 196157173 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTGGG TTACCAAACA GCGTGTAGAA AATACGGTTG TGATTTTTGC CGATCTTTCT
GGCTTTCAGC AGTTCGCCGC TGACTATGGC GATATGACAT GTATGGGAGT TATTGAAGGC
CTATTTGAAA AGTTCGACGA GTTTGCCCGC CTACATCAAT TAACCCCACT AAAAACTAAT
GGCGATCAAT ATATCGCCGT TGGGTTTTCG GCTCATCCGA AGCACATTCT TCCTAGCAGC
TTTAACACGA ATATTCATCA GCGCGCTTCA CTCAAAGAAT CACTTTGCCG GTCTGTTCGC
GATGCTGTTT CCGCGGCATT TCACTTTGCG TGTAAAGCCA GAGACGAAGT GAATAGCCAT
CCACTTTTGG TATCTTCTTC ATGTTATTTA CGTGTAGGTA TAGCGACAGG TTCCGTCATT
GCAGGGCGAT CATCTCGCCG CTTTGGAAAT TTCGATATTT GGGGAGCGAC CGTTAACCGT
GCAGCCATGT TAGAGCAGTT TACGGCGCCA AACACAATTG CAATGTGTGA TAGAAGCGGC
TCATTATTAA TAAGTCCTGA ACACAATAGG CCGCTACTCC ATGGCAACCA CCTATTGCTT
TACCCAAAGT ACTTAAAAAC TAAAGCCGAA GGTATTCTTG CGCATATTTG TTAA
|
|---|
| Protein sequence | MNWVTKQRVE NTVVIFADLS GFQQFAADYG DMTCMGVIEG LFEKFDEFAR LHQLTPLKTN
GDQYIAVGFS AHPKHILPSS FNTNIHQRAS LKESLCRSVR DAVSAAFHFA CKARDEVNSH
PLLVSSSCYL RVGIATGSVI AGRSSRRFGN FDIWGATVNR AAMLEQFTAP NTIAMCDRSG
SLLISPEHNR PLLHGNHLLL YPKYLKTKAE GILAHIC
|
|---|
| |