| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02366 |
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| Symbol | |
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| ID | 6777738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2552604 |
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| End bp | 2554823 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755805 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_002126656 |
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| Protein GI | 196157167 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.104903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGT CTAAGATCAT CTACACGAAG ACTGATGAAG CGCCAATGCT GGCGACTTAC
TCACTTCTTC CAATTATCCA GAAGTTTGCT GCGGCTGCAG ATATCGACGT TGAGCTAAGC
GATATTTCAC TTGCTGCACG TGTTTTGGCA AATTTCCCTG AGTATCTTTC TGAAGAACAA
AAAGTGCCAG ACGCGCTAGC TGAACTGGGT GAGATGACCC AAGACCCGAA CGCTAACATC
ATCAAGCTTC CAAACATCAG TGCCTCAATT CCACAGCTTC GTGCAACTAT CAAAGAATTA
AACGCAAAAG GCTTTAATGT ACCAGCGTTC CCTGATTCAC CAAAAACTGC TGAAGAAGAA
GACATTCGCG AACGTTACGG TAAGGTGCTA GGTAGTGCAG TAAACCCTGT ATTACGTGAA
GGTAACTCAG ATCGCCGTGC CCCAACTGCA GTTAAAAATT ATGCACGCAA GCACCCGCAT
TCAATGGGTG AGTGGTCTCA AGCATCACGT TCTCACGTAG CCCACATGCG CGGTGGCGAT
TTCTACTCTG GTGAGAAATC AATGACGGTT GAGAAAGACG GTCACGTAAG TATCGAATTT
ACGGGTAAAG ATGGTAGTAA GAAAACCCTT AAACCGCGTG TGGACTTGCT AGCTGGCGAA
GTTATCGACG GCATGTTTAT GAGCAAGAAA GCGCTGTGTG AATTCTTCGA AGAGCAAATT
GAAGATGCGA AAAACACGGG CGTTCTTTTC TCACTACACG TAAAAGCGAC CATGATGAAG
GTGTCTCACC CAATCGTATT CGGTCACTGT GTAAAAGTAT TTTACAAAGA TCTATTCAAC
AAATGGGGTG ACCTGTTTGA AGAGCTAGGT GTTAACCCTA ACAACGGTCT TGGTAGCGTT
TACGACAAAA TTGCAAGTCT ACCAGAAAGC CAGCGCTCAG AAATTCAAAA AGATATCAAC
GCATGTTATG CCGACCGCCC TCCAATGGCG ATGGTGAACT CTGACAAAGG TATCTCGAAC
CTTCACGTGC CAAGTGATGT AATCGTTGAT GCTTCTATGC CAGCCATGAT TCGTAACTCT
GGTCAAATGT GGGGACCAGA TGGAAAGGCG CACGACACGA AAGCGGTGAT TCCAGAAAGT
ACTTATGCAA CCATTTACCA GGAAGTTATC AACTTCTGTA AAACGCATGG TGCATTCGAC
CCGACAACGA TGGGTACAGT GCCTAACGTT GGTCTAATGG CGCAAAAAGC AGAAGAGTAC
GGTTCACACG ACAAAACGTT TGAACTAGAA GCAGACGGTA CTGTGTCGAT TATTGACCAA
GACGGCAATG TTCTTATTTC TCACGATGTT GAAGAAGGTG ATATCTGGCG TATGTGTCAG
GTGAAAGACG CACCTATTCA AGATTGGGTT AAGCTAGCGG TGACTCGTTC ACGTCAATCG
GGTATGCCTG CAGTATTCTG GCTAGATGAC GAGCGTGCTC ACGATGCGCA ACTTATCAAG
AAAGTTGAAA AGTACCTTCA AGACCATGAT ACGAACGGTT TAGACATTCA AATTATGTCT
CCTGTACGCG CTATTCGCTA CAGCATGGAA CGTGCGCTTC GCGGTTTAGA CACTATTTCA
GTAACAGGTA ACGTACTTCG TGATTACCTA ACTGACCTAT TCCCAATTCT CGAGCTTGGT
ACTAGTGCAA AAATGCTATC AATTGTTCCA TTGATGGCGG GCGGCGGTCT TTACGAAACT
GGTGCGGGTG GTAGTGCGCC TAACCACGTT CAGCAGGTTG TTGAAGAATG TCACTTGCGC
TCGGACTCGC TAGGTGAATT TCTGGCACTA GCGGTATCGC TAGAAGATGT TGCTATCAAG
CACAGTAACA CCAAAGCAAA AGTTATTGCT ACAGCCCTTG ATAAAGCGAC GGAGAAGTTG
CTTAACAATG GTAAGTCTCC GCTACGTAAA GCGGGCCAGC TAGACAACCG TGGTAGCCAT
GTTTACCTGG GTCTATACTG GGCTGAAGAA GTAGCGAACC AAACTGAAGA TGCAGATCTT
GCAGCGCAGT TTAAGCCAGT TTATGAAGAG CTATCAGCGA AAATTGATGA TATCTTGGCT
GAGATTGATG CGACTCAAGG CAGTGCACAA GAAATTGGCG GTTACTACTA CCCAGACGAA
GATAAGCTTT TTGCAACGAT GTCTCCAAGT AAGACACTTA AAACTATTCT TGGCGCTTAA
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| Protein sequence | MTKSKIIYTK TDEAPMLATY SLLPIIQKFA AAADIDVELS DISLAARVLA NFPEYLSEEQ
KVPDALAELG EMTQDPNANI IKLPNISASI PQLRATIKEL NAKGFNVPAF PDSPKTAEEE
DIRERYGKVL GSAVNPVLRE GNSDRRAPTA VKNYARKHPH SMGEWSQASR SHVAHMRGGD
FYSGEKSMTV EKDGHVSIEF TGKDGSKKTL KPRVDLLAGE VIDGMFMSKK ALCEFFEEQI
EDAKNTGVLF SLHVKATMMK VSHPIVFGHC VKVFYKDLFN KWGDLFEELG VNPNNGLGSV
YDKIASLPES QRSEIQKDIN ACYADRPPMA MVNSDKGISN LHVPSDVIVD ASMPAMIRNS
GQMWGPDGKA HDTKAVIPES TYATIYQEVI NFCKTHGAFD PTTMGTVPNV GLMAQKAEEY
GSHDKTFELE ADGTVSIIDQ DGNVLISHDV EEGDIWRMCQ VKDAPIQDWV KLAVTRSRQS
GMPAVFWLDD ERAHDAQLIK KVEKYLQDHD TNGLDIQIMS PVRAIRYSME RALRGLDTIS
VTGNVLRDYL TDLFPILELG TSAKMLSIVP LMAGGGLYET GAGGSAPNHV QQVVEECHLR
SDSLGEFLAL AVSLEDVAIK HSNTKAKVIA TALDKATEKL LNNGKSPLRK AGQLDNRGSH
VYLGLYWAEE VANQTEDADL AAQFKPVYEE LSAKIDDILA EIDATQGSAQ EIGGYYYPDE
DKLFATMSPS KTLKTILGA
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