| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02364 |
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| Symbol | |
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| ID | 6777727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2551849 |
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| End bp | 2552067 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642755803 |
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| Product | stress response protein CspD |
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| Protein accession | YP_002126654 |
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| Protein GI | 196157165 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000164326 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGGTTG GCAAAGTTAA ATGGTTTAAC AACGCAAAGG GTTTTGGATT TATCGTTCCT
GAGGACGGCG GCGAAGATAT TTTCGCGCAT TACTCTACGA TTCAAATGGA AGGCTACCGT
TCGCTAAAAG CGGGACAAGA AGTGACGTTC GAAGTACAGC AAGGCCCTAA AGGGCTACAC
GCTGAGAACA TTGGCTTCAA AGAAGAACCA GAGCGTTAG
|
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| Protein sequence | MAVGKVKWFN NAKGFGFIVP EDGGEDIFAH YSTIQMEGYR SLKAGQEVTF EVQQGPKGLH
AENIGFKEEP ER
|
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