| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02347 |
|---|
| Symbol | |
|---|
| ID | 6777620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2532252 |
|---|
| End bp | 2534591 |
|---|
| Gene Length | 2340 bp |
|---|
| Protein Length | 779 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642755786 |
|---|
| Product | putative formate dehydrogenase oxidoreductase protein |
|---|
| Protein accession | YP_002126637 |
|---|
| Protein GI | 196157148 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01701] oxidoreductase alpha (molybdopterin) subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA AACGGAATAT TAAGCAATAC GGCAACCCTG CTGGCGGATG GGGTGCATTA
AAAAGCGTAA CCCAAAGTTG GCTCCAGAGT GAAAAGCCGC TCAAAAACCT TCGGGCCATG
CTAAAAACCA ATCAAGATAA AGGCTTCGAC TGTCCGGGTT GTGCATGGGG TGAGTCGCCA
GAAAGCGGTT TAGTCAAGTT TTGTGAAAAC GGGGCGAAAG CCGTAAATTG GGAGTCAACC
GGTCGCTACG TAGGCCCGGA ATTTTTCGCT GACTATACGG TGAGTGCGTT GAAAAAACAC
ACTGACTACT GGCTCGAGTC TCAAGGCAGG CTAACCCACC CGGTCCGTTA CAATAACCAA
ACCGACCGAT ATGAAGCCAT CAACTGGGAT GACGCGTTTG GCCTAATCGC TCAACACCTG
AACGGGCTGA GCTCTCCGCA TCAGGCAGAG TTCTATACGT CAGGGCGCGC TAGCAATGAA
GCAGCTTATC TTTATCAATT ATTCGTTCGC GCATTTGGCA CCAATAACTT CCCAGACTGC
TCAAACATGT GCCACGAAGC ATCGGGTCAA GGAATGAAGC CCACCATAGG CGTAGGCAAA
GGTACAGTCA CGTTCGATGA TTTCGAAAAG GCAGATACCA TCTTTGTTAT TGGACAAAAC
CCGGGCACTA ACCACCCGCG CATGTTAGAG CCACTGCGCG ATGCGGTGCG AAGAGGCGCC
CAAGTCGTTT GCTTAAACCC GCTAAAAGAG CGGGGGCTAG AAAAGTTCCA ACACCCTCAG
CACCCTATTG AAATGCTCAC CAATGGTTCA ACGCCAACCA ATACCGCTTA CTTCAGGCCT
GCCCTTGGTG GCGACATGGC AGTCATGCGC GGCATAGCTA AATGGCTGTT AGCCTGGGAG
CAGGAAGCAA AAGCGAACAA TGCCCCTCCC GTATTCGACC ACGACTTTAT CAATGCACAT
ACGAATGGCA TGGATGACTA TTTAACTGCT GTTGAAGCGA CCAGCTGGGA GCATATTGAA
GCGCAGAGTG GTTTATCGAA AGAAGACATC CGCCACGCGG CAACTATGTA CAAGCGCGGA
GAACGGGTAA TCATGTGCTG GGCTATGGGA ATTACCCAGC ACAAACACTC TGTTGCTACG
GTTCAAGAAA TCGTGAATGT GCAGCTATTG CGAGGCAATG TTGGCAAGCC TGGCGCCGGT
CTGTCGCCTG TTCGAGGCCA TAGTAACGTT CAGGGTGACA GAACCGTGGG TATTAACGAA
GTGCCGCCTA AAGCGTTACT CGACGCGCTG GAAAACAAGT TTAACTTTGT GGTACCACGA
GAGAGAGGTC ACAACACTAT TCAAGCCATT CAGGCCATGG AACGTGGCGA TGCCAAAGTC
TTCATTGGCT TAGGTGGTAA TTTCGCACAA GCCACACCGG ATACGCCGCG CACCCACGCC
GCATTATCAA AATGCGATTT AACTGTGCAT ATCGCCACTA AATTAAACCG TTCTCACTTA
ACGACGGGCA AAGATGCGCT TATTCTACCC TGTTTGGGTA GAACTGAAGT CGACATGCAG
GCTAGCGGAC AGCAAGGTGT TACCGTTGAA GATACCTTTT CAATGGTCCA CCTATCCTAT
GGACAACTAC CGCCGAGCTC ACCTGAACTT CGCTCGGAAC CGGCTATCAT TGCGGGTATC
GCAAAAGCCA CGTTAGGCAA TACGCCTGTA GACTGGGATC ATGTAGTCAG TAATTACGAC
AATATACGCG ACCTAATTGC CGATACCATT GAGGGCTTTA AAAACTTTAA TAGCAAAGTG
GCGAACCCCG GGGGCTTTCA TCTAGGCAAT GCGGCGAGCG AAAGACGGTG GCTAACACCA
TCGGGTAAAG CGGAATTTGC AGCCAATACA CTGCCAAACT CGCTATTAAA CGATGATGTA
GTCGCTCGTG GCGAAAAACC AGACTTAATC TTACAGACAT TGCGCTCGCA CGATCAGTAC
AACACTACCA TCTATGGCAT GGATGACCGT TACAGAAATG TGTTTGGCGC TAGAGATGTC
TTGTTCGTCA ATGAGAGCGA TATTCGAAAA CTGGGCTTCA ATGACGGGGA TAAAGTAGAC
ATTACGTCTT TATGGAATGA CGGAAGAACC CGTCAGATAA AGCAATTTAT GTTGGTGGCT
TATGATATAC CCCAAGGACA AGCCGCGGCC TATTACCCGG AAACCAACCC GCTGGTACCA
TTAGAAAGTT ATGGTGACGG AACCTTCACA CCAACGTCAA AATTTATTGC GATCAAACTT
TCAAAGTCCG AGTCGGATGG AGGAATTGTG GTGAATACGC TCTCGGTGAG TCATATTTAG
|
|---|
| Protein sequence | MSDKRNIKQY GNPAGGWGAL KSVTQSWLQS EKPLKNLRAM LKTNQDKGFD CPGCAWGESP
ESGLVKFCEN GAKAVNWEST GRYVGPEFFA DYTVSALKKH TDYWLESQGR LTHPVRYNNQ
TDRYEAINWD DAFGLIAQHL NGLSSPHQAE FYTSGRASNE AAYLYQLFVR AFGTNNFPDC
SNMCHEASGQ GMKPTIGVGK GTVTFDDFEK ADTIFVIGQN PGTNHPRMLE PLRDAVRRGA
QVVCLNPLKE RGLEKFQHPQ HPIEMLTNGS TPTNTAYFRP ALGGDMAVMR GIAKWLLAWE
QEAKANNAPP VFDHDFINAH TNGMDDYLTA VEATSWEHIE AQSGLSKEDI RHAATMYKRG
ERVIMCWAMG ITQHKHSVAT VQEIVNVQLL RGNVGKPGAG LSPVRGHSNV QGDRTVGINE
VPPKALLDAL ENKFNFVVPR ERGHNTIQAI QAMERGDAKV FIGLGGNFAQ ATPDTPRTHA
ALSKCDLTVH IATKLNRSHL TTGKDALILP CLGRTEVDMQ ASGQQGVTVE DTFSMVHLSY
GQLPPSSPEL RSEPAIIAGI AKATLGNTPV DWDHVVSNYD NIRDLIADTI EGFKNFNSKV
ANPGGFHLGN AASERRWLTP SGKAEFAANT LPNSLLNDDV VARGEKPDLI LQTLRSHDQY
NTTIYGMDDR YRNVFGARDV LFVNESDIRK LGFNDGDKVD ITSLWNDGRT RQIKQFMLVA
YDIPQGQAAA YYPETNPLVP LESYGDGTFT PTSKFIAIKL SKSESDGGIV VNTLSVSHI
|
|---|
| |