| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02339 |
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| Symbol | |
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| ID | 6777570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2524423 |
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| End bp | 2525364 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642755778 |
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| Product | ribosomal large subunit pseudouridine synthase C (pseudouridylate synthase) (uracil hydrolyase |
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| Protein accession | YP_002126629 |
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| Protein GI | 196157140 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.336245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAG AAGCCCCAAT AAAAGTACGT TTTGTAACGG TTGACGCCGA TTTGGCTGGT
CAACGTATCG ATAATTTTTT GCGCACCCAG CTAAAGGGCG TGCCGAAAAG CATGATCTAT
CGCATTTTGC GCAAAGGCGA AGTGCGAGTG AATAAAGGCC GCGTTAAGCC TGAATACAAG
TTACAAGCTG ATGACATTGT TAGAATTCCG CCTGTTCGTG TGTCGGAAGG GGCGCCCGCG
CCTTCGCCTA AACTCGACAA AATTGCTGCG TTAGAGTCTC ATATTCTATT TGAAGACGAT
CGTATCCTGG TGATGAATAA ACCATCAGGT ATGGCCGTGC ACGGCGGCAG CGGTTTAAGT
TTCGGTTTAA TAGAAGGTTT ACGTGCGTTA CGCCCTGACG CCAAGTTTAT GGAACTGGTC
CATAGATTAG ACAGAGATAC CTCGGGCTGC ATATTAATTG CAAAAAAGCG TTCTGCACTT
CGTCATATGC ACGAGCAACT GCGCACGGGG AAAATGGACA AACGCTACAA CGCCCTTGTT
TCGGGTGAAT GGCCTAAGAA TCGTTTTAAG GTGAAAGCGC CGCTTCGCAA GAATGTGCTT
CAATCTGGCG AGCGAATGGT TAGCGTGAGC GACGATGGTA AGCCCTCAGA AACGCGCTAC
CGCATTTTAG AAGAGTATGC GGGGGCGACA TTGGTAGAAG CTTCGCCGAT AACAGGCAGA
ACACACCAAA TTCGCGTTCA TTGCTTACAT GCTGGCCATC CGATTGCCTG CGACCCTAAA
TACGGTGATG CGGATTTTGA TGCTTCAATG AGACAAAAGG GGCTAAATAG ATTGTTCCTT
CATGCACGCA GCATCTCGTT GTTGCATCCT GCAACAGAAG AACGGGTGAC ATTTTCTGCA
CCTTTAGACC CCACACTTTC AAATACGCTT AAAGCACTGT AA
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| Protein sequence | MKEEAPIKVR FVTVDADLAG QRIDNFLRTQ LKGVPKSMIY RILRKGEVRV NKGRVKPEYK
LQADDIVRIP PVRVSEGAPA PSPKLDKIAA LESHILFEDD RILVMNKPSG MAVHGGSGLS
FGLIEGLRAL RPDAKFMELV HRLDRDTSGC ILIAKKRSAL RHMHEQLRTG KMDKRYNALV
SGEWPKNRFK VKAPLRKNVL QSGERMVSVS DDGKPSETRY RILEEYAGAT LVEASPITGR
THQIRVHCLH AGHPIACDPK YGDADFDASM RQKGLNRLFL HARSISLLHP ATEERVTFSA
PLDPTLSNTL KAL
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