Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02336 |
Symbol | |
ID | 6777540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2522384 |
End bp | 2523046 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642755775 |
Product | hypothetical protein |
Protein accession | YP_002126626 |
Protein GI | 196157137 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000124233 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGCAAA GCATCATTAT ATCGCGCAAT GTAACATTAT CACCTTGTGA GGCACATAAT CTTATAATGT GTGTTAAATC ACAATTTTGC TTTGACAGAA AGGGGGCGAC GCTATATCAT GCGCGCCCTA TGCAGAAAGT GAAACTCCCT CATTCGGTTG AACCGACTAA AAGCGCCATG AAACGTTCCG ATTATCGGGG TGTGATTGTG TCTAAAGATA TGGAACGATT GAGCGAGGCG GTTGTCCGAT GCAATGACTA CGTGGACGCA GAAGTACAGT TCGAAAAAGA CGCGCAGGGT CTTACTGTTT TTCACGGCCA TCTAGCCACG CAGGTAACAC TTATCTGTCA AAGGTGTAAT GGTGAACTCG ATTATCCCGT GGAAGCGGAA TTCTGTTTTA CTCCAGTGCA GGGAGAAGAG CAGGAAAGCG ACGACATCAT TCCCGAGGCT TATGAACCGG TAGAGGTCAA CGACCACGGA GAAGTTAATC TGCTTCAAAT TTTTGAAGAC GAGCTACTGT TATCTTTGCC AATTGTGCCC CTTCATGCAG AGTCGGAGTG TACAGTGAAG CAAGACGATA TGTCGTTTGG AAAGATTGAA CCGGAACAAG AGCGACAAAA CCCTTTCGCG GTTTTGAAAG AACTTAAGCG AGACCAGGAG TAA
|
Protein sequence | MLQSIIISRN VTLSPCEAHN LIMCVKSQFC FDRKGATLYH ARPMQKVKLP HSVEPTKSAM KRSDYRGVIV SKDMERLSEA VVRCNDYVDA EVQFEKDAQG LTVFHGHLAT QVTLICQRCN GELDYPVEAE FCFTPVQGEE QESDDIIPEA YEPVEVNDHG EVNLLQIFED ELLLSLPIVP LHAESECTVK QDDMSFGKIE PEQERQNPFA VLKELKRDQE
|
| |