Gene MADE_02336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02336 
Symbol 
ID6777540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2522384 
End bp2523046 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content46% 
IMG OID642755775 
Producthypothetical protein 
Protein accessionYP_002126626 
Protein GI196157137 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000124233 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCAAA GCATCATTAT ATCGCGCAAT GTAACATTAT CACCTTGTGA GGCACATAAT 
CTTATAATGT GTGTTAAATC ACAATTTTGC TTTGACAGAA AGGGGGCGAC GCTATATCAT
GCGCGCCCTA TGCAGAAAGT GAAACTCCCT CATTCGGTTG AACCGACTAA AAGCGCCATG
AAACGTTCCG ATTATCGGGG TGTGATTGTG TCTAAAGATA TGGAACGATT GAGCGAGGCG
GTTGTCCGAT GCAATGACTA CGTGGACGCA GAAGTACAGT TCGAAAAAGA CGCGCAGGGT
CTTACTGTTT TTCACGGCCA TCTAGCCACG CAGGTAACAC TTATCTGTCA AAGGTGTAAT
GGTGAACTCG ATTATCCCGT GGAAGCGGAA TTCTGTTTTA CTCCAGTGCA GGGAGAAGAG
CAGGAAAGCG ACGACATCAT TCCCGAGGCT TATGAACCGG TAGAGGTCAA CGACCACGGA
GAAGTTAATC TGCTTCAAAT TTTTGAAGAC GAGCTACTGT TATCTTTGCC AATTGTGCCC
CTTCATGCAG AGTCGGAGTG TACAGTGAAG CAAGACGATA TGTCGTTTGG AAAGATTGAA
CCGGAACAAG AGCGACAAAA CCCTTTCGCG GTTTTGAAAG AACTTAAGCG AGACCAGGAG
TAA
 
Protein sequence
MLQSIIISRN VTLSPCEAHN LIMCVKSQFC FDRKGATLYH ARPMQKVKLP HSVEPTKSAM 
KRSDYRGVIV SKDMERLSEA VVRCNDYVDA EVQFEKDAQG LTVFHGHLAT QVTLICQRCN
GELDYPVEAE FCFTPVQGEE QESDDIIPEA YEPVEVNDHG EVNLLQIFED ELLLSLPIVP
LHAESECTVK QDDMSFGKIE PEQERQNPFA VLKELKRDQE