Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02332 |
Symbol | |
ID | 6778932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2519168 |
End bp | 2520016 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642755771 |
Product | 4-amino-4-deoxychorismate lyase |
Protein accession | YP_002126622 |
Protein GI | 196157133 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.144635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAA TCCCTAGCGC TACGCCTATT TCACCGAGTG ATAGGGCCTT CAATTATGGT GATGGTGTAT TTTCTACTCT ATTGGTGCAC AACCAAAAGC CACAACTGTA TTCTTATCAC CTTTCTCGGT TAGAACACGA TGCGGCCGCG ATAAAAATTA CCGTCGATAC CTGTGCCTTG GAAACCGCTA TTAACGAACA GATAGCGGCG TTCAGCAACT CGTCGAATGA TATTTCCCCA TCAAAATATG TATTAAAAGT ACATGTTTCG GGCGGACAAG CGGGCAGAGG CTATGCACGA AGTGAAGACA ATGTGCCTTT GGTCAGGTTC AGTCAGCATC CCTATCCTGC ACATTACGAG GGGATGGCTA AGCAAGGTAT GTCATTAATT TGTGCACAAA CCCGACTGGC TATTCAGCCG TTGCTTGCAG GTGTAAAGCA CATGAATAGA TTAGAGCAGG TACTGATAAA GCATGAAGTT AATGAAGCAC ATGCCGATGA TGCCCTTGTA TGCGACACCA ACGATAACTT AATTGAAGCA AGTGCCGGTA ACGTCTTCTT CTATTCGCAG GGTGAGTGGT ATACCCCTTC GCTCAAAGGA AGTGGGGTGA ATGGCGTGGT CAGACAGTGT TTGATTGATT CGCTGCTAAA CAATAATCAC ACCTTACACG TAGGTGAGTA TCAGCTTTCA CATATTGGCA ATGCTAGTGC CGTGGTGATC ACCAATGCGT TGATGGGCGT GATGCCGGTG AAAAGCGTGC GTATGCCAGA TCACAGCAAG TTAGAATTTG ACGTGGCAAG TGAAAGCGTT CTTGAATTAA GTAATTTGTT GGCACGCGCC CTACGTTAA
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Protein sequence | MRIIPSATPI SPSDRAFNYG DGVFSTLLVH NQKPQLYSYH LSRLEHDAAA IKITVDTCAL ETAINEQIAA FSNSSNDISP SKYVLKVHVS GGQAGRGYAR SEDNVPLVRF SQHPYPAHYE GMAKQGMSLI CAQTRLAIQP LLAGVKHMNR LEQVLIKHEV NEAHADDALV CDTNDNLIEA SAGNVFFYSQ GEWYTPSLKG SGVNGVVRQC LIDSLLNNNH TLHVGEYQLS HIGNASAVVI TNALMGVMPV KSVRMPDHSK LEFDVASESV LELSNLLARA LR
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