| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02318 |
|---|
| Symbol | |
|---|
| ID | 6777428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2503904 |
|---|
| End bp | 2506036 |
|---|
| Gene Length | 2133 bp |
|---|
| Protein Length | 710 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642755757 |
|---|
| Product | probable trifunctional enoyl-CoA hydratase/delta3-cis-delta2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein |
|---|
| Protein accession | YP_002126608 |
|---|
| Protein GI | 196157119 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATGA CTGAGATGGA AAATAAAGCT GTCGAATACG CAGTGCAGCA GGGTGTTGCC
ACCCTTACAA TGCAAAGCGC ACCGGTAAAT GCGCTATCAC GCGCAATAAG AATTGGCTTA
ATTGAAGGTA TAGAAAGCGC GCTTAACGAT GCAAGCGTGA AAGCAATCGT TGTTACTTCT
TCACTACCCA TTTTTTCTGG TGGTGCAGAC ATCAGTGAGT TTTCCGGTGG CGATTTGTCG
CCCATGTTGC CTGAAGTTTT AGACAAGATA GAAAACGCGA CAAAACCCGT GGTTGCCGTA
CTTCCCGGGC CAGCCTTTGG CGGCGGGTTA GAAGTAGCGT TAGCGTGTCA CCACCGCATT
ACTTTTGCGG GCAACAAAGT CGGCCTTCCA GAAGTTAATC TTGGAATTTT GCCTGGGGCT
GGCGGTACGC AGCGCCTTCC GCGTTTAGCC GATGTTCAAA CTTCCCTTGA AATGATTGTA
ACGGGCAAAC CTACATCAGT AGTGAAGTTA CCAGGTGTTT TTGACAAAAT TTCCGATAAA
CCAGAGCATT TGCTTGAAGA TACCAAAGCG TATCTGCAGG GCCTTACGCC AGATAAAGCC
ATCAAACGTA CTTGCGACAT TTCGCTTACG ATGACAGATG AAACTAAAGG CGTGTTTGAT
GCGGTAACAG CGCAAACGAA AAAAGCGACC CGTGGCTTTT TCGCTCCCCT TAAGTGTATT
GAGGCAGTGC GCGGCGCGTA TACGTTAGCG TTTGACGATG GCCTTAAAAA CGAAGGCAAG
TTGTTCATGG AATGTATGAA CACGCCACAA GCCAGAGCAC AGCAGCACTT CTTCTTTGCA
GAGCGAGCGG CAGGTCATGT GAGTGATTTT GATAAGAACA CGCCAGAGCG CAGTATCGAA
AAAGTCGCAA TTATAGGCGC AGGTACCATG GGGGGCGGAA TTGCAATGAA CTTTGCTAAT
GCCGGTATTC CCGTAACTAT GCTTGAGCTT AAAGAAGAGG CGCTGGAAAA GGGTCTTGCA
CTCATTCGCA AGAACTACGA GAACTCTGCG AAAAAAGGCA AGCTTACTCA AGAACAAGTA
GAAAGTCGCA TGGCGCTGCT ATCTGGCACC ACATCATACG ATGATCTCTC TGATGTCGAC
TTAGTCATCG AAGCTGTGTT CGAGAAAATG GAAGTAAAGA AAACAGTATT CTCAACGCTT
GATAAAGTGT GCAAGCCCGG CGCTATTTTG GCCTCGAATA CATCGACACT GGACATAGAC
GAAATTGCTA CCGCGACGTC ACGCCCAGAA GATGTGATTG GCCTGCATTT CTTCTCGCCT
GCCAATGTTA TGAAGCTGCT TGAAGTGGTT AAAGCAGAAA AGACATCCGC CGAAGTTATC
AAAACCTGCA TGAAGATGGC TAAGCGCATT AGGAAAGTAG CCGTGTTAGT AGGTGTATGC
TTTGGATTCG TGGGGAATCG TATGATTGAA CCTTACGGTC GTGAAGCCAA TCGATTGCTT
CTTGAAGGAG CGACGCCTGA ACAGGTTGAT CGCGTTTTAA CAGAATTTGG CATGCCAATG
GGGCCGTTCA CGATGGGCGA CATGGCGGGC TTAGATATTG GTTACTATGT GCGTCAATCT
CGCCAAGAAC ACATTTCCCA CGATCCCGCC TACGGCGCGG TTGCAGATCG CCTTGTAGAG
AAAGGGCGCA ACGGGCTAAA AACCGGGCGT GGTGCTTACA ACTACGAGCC AGGGAGTCGC
GTTCCTATCC CAGACCCTGA AGTACTTGAA ATTGCTAAGC AAGAAGCGGA ACGCCTAGGC
GTTCAACAGC GTTCTGACAT CTGCGATGAA GAAATTCTTG TTCGTGTTAT GTATTCACTG
ATCAATGAAG GTGCGGCGAT TTTAGAGGAA GGTATTGCGG CAAAGTCTAG CGATATTGAT
GTGATTTATG TTTACGGCTA TGGCTTCCCA GTGTACCGCG GCGGCCCTAT GCAATATGCC
GATGAAGTAG GGCTTGGGAC CATTTTAGAT AAGCTAACCA CTTATCGCGA TCAGCTTGGC
GAATACGGAA AGATGTGGTT AGAGCCAAGT GATTTATTGG TAAAGCTGGC CCAAGAGGGC
GGCAGTTTTA GAAGCTATAA CGCAAAAGCC TAG
|
|---|
| Protein sequence | MVMTEMENKA VEYAVQQGVA TLTMQSAPVN ALSRAIRIGL IEGIESALND ASVKAIVVTS
SLPIFSGGAD ISEFSGGDLS PMLPEVLDKI ENATKPVVAV LPGPAFGGGL EVALACHHRI
TFAGNKVGLP EVNLGILPGA GGTQRLPRLA DVQTSLEMIV TGKPTSVVKL PGVFDKISDK
PEHLLEDTKA YLQGLTPDKA IKRTCDISLT MTDETKGVFD AVTAQTKKAT RGFFAPLKCI
EAVRGAYTLA FDDGLKNEGK LFMECMNTPQ ARAQQHFFFA ERAAGHVSDF DKNTPERSIE
KVAIIGAGTM GGGIAMNFAN AGIPVTMLEL KEEALEKGLA LIRKNYENSA KKGKLTQEQV
ESRMALLSGT TSYDDLSDVD LVIEAVFEKM EVKKTVFSTL DKVCKPGAIL ASNTSTLDID
EIATATSRPE DVIGLHFFSP ANVMKLLEVV KAEKTSAEVI KTCMKMAKRI RKVAVLVGVC
FGFVGNRMIE PYGREANRLL LEGATPEQVD RVLTEFGMPM GPFTMGDMAG LDIGYYVRQS
RQEHISHDPA YGAVADRLVE KGRNGLKTGR GAYNYEPGSR VPIPDPEVLE IAKQEAERLG
VQQRSDICDE EILVRVMYSL INEGAAILEE GIAAKSSDID VIYVYGYGFP VYRGGPMQYA
DEVGLGTILD KLTTYRDQLG EYGKMWLEPS DLLVKLAQEG GSFRSYNAKA
|
|---|
| |