| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02298 |
|---|
| Symbol | |
|---|
| ID | 6775544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2481995 |
|---|
| End bp | 2483326 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642755732 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | YP_002126588 |
|---|
| Protein GI | 196157099 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAGT TGTCTCTTCG CCTAAGGAGC ATTTTTCTCG CAATAGTCCT TTTAGCGTTC
TTCGCTCCTT TTACCGTTGT TATTTTAGAT GAAGCTTATA CCGACAGCCT GACCGAAGCT
AAAATGAGCG AGCTTAGGTT GATGAACCTA GGCTTATTAT CAGCGTTTGA GCTAGATGGC
GATCTGCCCT ATATGCCAGA AATTTTATAT GAGGAGCAGC TGAACCTTCC AGGCTCAGGC
TACCTTGGCG TGATCGTGTT TCGAGATGAA GTTATTTGGC AATCTGCGTC TGCATTAGAG
TATACATTTA CCCCGCCTAA TATAGATGTA GCCGTTGGCA ATGAGCTTTT TACGGAGTCG
TATACACCAG CCTTCGATAA AAATGCTAAC TTTTTCGTTT ATGCTTTCAC CGCTGAGTTT
GCTTCTAGCC GAGACTTTGA GCCTGTACGG TTTTATATTT TTAATAATAG AGCGCTTTTC
GAAGATGAAC GAAGCACCTT TTTAAGCACT ACATGGCAAT GGATTTTTAC GCTGTGTTTA
GCGCTGCTTA TATTTATCGT AATTGGCATA AGCCTTGTAC TTTTACCTGT GAGAAAATTA
ATTGACGAGA TATCACAGGC TTCTCGTGGT GAAAAGCGTC AACTATCGTC GCGGTACCCC
GTTGAATTTG ATTCTTTAAA GCAGTCTATA AATGGGCTTC TTCATACTGA GGCGGCTCAA
AGAACAAGGT ACAAAAACAG CTTAGGTGAT TTGGCGCATA GCTTGAAAAC ACCTCTTGCC
GTCGCCTCAG GGCATAAGAC ACTACCAAGT GAAGTAGGCG AAGCGCTAAG ACAAATTGAT
AACATCATAA AACGTCAGCT AAAAAGAGCT AGTGCCGGTA AAACGGGGTG GCAACAAGGC
ATTGCCGTGC AACCTGTTCT CAATAAACTC GCTGATGCAA TGGACAAAGT TTATCAAGAA
AAAGCCCTAA CTATTGAGTT CGAAGTAGAT GATAACATTC AGTTTAAAGG TGATGAAACT
GACTTCATGG AACTTAGCGG AAACCTTCTC GACAACGCGT GTAAAGCGGC GAAAAATAGG
GTTCTCGTAT CCGCAAAAAT CAAGTCCGGT TGGCTTGTTA TACATGTCGA AGATGATGGC
CCAGGCATAC CGTACGATAA AAAAACACTG CTTTTAGAAC GCGGAACGCG TTTAGACACC
TACGAAGAAG GCCATGGCAT AGGTATGGCG CTAGTAGCTG ACTTAGTGTC AATTTACGAA
GGAAGAATGC AGATTGAGGA TAGTGATCTA GGTGGAGCAA ATATAGTACT TCAGTTTCCG
AATCACGTGT AA
|
|---|
| Protein sequence | MRQLSLRLRS IFLAIVLLAF FAPFTVVILD EAYTDSLTEA KMSELRLMNL GLLSAFELDG
DLPYMPEILY EEQLNLPGSG YLGVIVFRDE VIWQSASALE YTFTPPNIDV AVGNELFTES
YTPAFDKNAN FFVYAFTAEF ASSRDFEPVR FYIFNNRALF EDERSTFLST TWQWIFTLCL
ALLIFIVIGI SLVLLPVRKL IDEISQASRG EKRQLSSRYP VEFDSLKQSI NGLLHTEAAQ
RTRYKNSLGD LAHSLKTPLA VASGHKTLPS EVGEALRQID NIIKRQLKRA SAGKTGWQQG
IAVQPVLNKL ADAMDKVYQE KALTIEFEVD DNIQFKGDET DFMELSGNLL DNACKAAKNR
VLVSAKIKSG WLVIHVEDDG PGIPYDKKTL LLERGTRLDT YEEGHGIGMA LVADLVSIYE
GRMQIEDSDL GGANIVLQFP NHV
|
|---|
| |