| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02274 |
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| Symbol | |
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| ID | 6775427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2440621 |
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| End bp | 2442303 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642755708 |
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| Product | Type I secretion system ATPase, PrtD |
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| Protein accession | YP_002126564 |
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| Protein GI | 196157075 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATG GCAATGGATT GATGCCTGTG AATAAAGCGT TGGCTAACAT TAAGTCAGCG
CTCCTCTATG TTTTTCTGTT TAGTTTAGCC ATTAACCTGT TGATGCTGGT CTCCCCCCTG
TACATGCTGC AGGTCTATGA TCGAGTATTG GTTTCAGGCA GTCATGCCAC TCTACTTTTC
CTTACAATTT TTGCTTTGGT TGCACTGATT GTGTTGGCCA CTTTAGATAT TGTTCGCGGG
ATCTTACTCG CTCGTTTAGG TAACGCTTTC GATAAAACAG TGAGCGGTTA CTTGTTTAAA
AACATTATTG AACAGGGAGG GCATAGCCAG CCACTACGTG ATGTAGACAC CGTGCGCAGT
TTTCTTTCAT CACCGGCACT CACCGCAATA ATGGACGCAC CGTTTACACC GCTTTATCTA
GCGTTAATCT ATATACTCCA CCCAATGCTA GGACATATCG CGCTGGCAGG CGCTATTGTA
CTTTTTAGCC TGGCGCTTTT AGGCGAGAAG ATGACCCGCA TCGCCCAAAA AGACAGTCAA
AATGCATCTA GCCAAGCACA TCGCTATACG GATGTTTGTG GGAAGAACCG AAATGCAGTT
TATGCAATGG GGATGAGCAG CCATATTCTT GCTAAATGGG ATATTCCACA TTTAAAAAGC
TTGAGTTTTG GAAGCCTTGC CAATTCCCGT AGTAGCGGCA TTTCGGCAAT ATCGAAAGGC
CTGAGATTTG CGCTTCAAGT AGGCATTTTA GGAATGGGGG CATTCCTTGT GATAGAGCAA
GAATCTTCGC CTGGAGTGAT GATTGCAGCC TCAATTGTAA TGGGAAGAGG GCTAGCACCT
ATTGAAGCAT CAATAAGTGG GTGGCGCTTA GTCATTGCTG CCCGTGATGC GAGGGAACGA
TTACTAGAAT ATCAAGGTAG TTTACCCCCC TTGACTGAAC CGCTACCGTT GCCAGAGCCA
AAAGGCAAGT TAACCGTTCA AAACGCTATC TTTCAGTTTC CGAACAGTGA AAAACCGCTG
ATAAGAGATG TAAGTTTAAC CATAAATCCG GGTGAGGTCA TTGGAATAAC AGGGCCCAAT
GCAGCGGGTA AAAGTACCTT AGGTAAATTG CTTTTAGGGC TTTATGAGCC TACCCATGGT
GATATTCGCC TTGATGGCGC GACATACGCC CAGTGGGACA GAAAATTACT AGGGCCTCAT
ATTGGTTACT TACCGCAAAG TGTGGAGCTT TTTCCTGGAA CAATCGCGGA GAACATCAGC
CGTTTCACCG ATGCAGATCC AAATGAAATC ATGCAAGCAG CGCAGCTTGC TGGTGTACAT
GAAATGATCC TTGGCTTGGA TAATGGCTAT AACTTCGCTG CTGATAACTT TGATGACGCT
TTGTCTGGTG GGCAAAGGCA GAGAATAGCG CTGGCGCGGG CAGTTTTTGG TTTGCCCGAG
CTCATTCTAC TTGATGAGCC GACGTCTTCT TTAGACGCAG AGGCAGAACG TACCGTCGCT
GCTGCGATAA AAGCGCTGAA GGAACATGGC GCCACAGTGC TAGTGATAGG GCATCGCCCA
GCTCTCATGA ACTTAACGGA TAAGTTATTA GTCATGCAAA ACGGTTCGCT CGCTGCTTTT
GGCCCCACCA ATGAAATAAT GGCTAAACTC GTCAGGCCTG CGGTTCAAAA AACAGGTACC
TAA
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| Protein sequence | MNNGNGLMPV NKALANIKSA LLYVFLFSLA INLLMLVSPL YMLQVYDRVL VSGSHATLLF
LTIFALVALI VLATLDIVRG ILLARLGNAF DKTVSGYLFK NIIEQGGHSQ PLRDVDTVRS
FLSSPALTAI MDAPFTPLYL ALIYILHPML GHIALAGAIV LFSLALLGEK MTRIAQKDSQ
NASSQAHRYT DVCGKNRNAV YAMGMSSHIL AKWDIPHLKS LSFGSLANSR SSGISAISKG
LRFALQVGIL GMGAFLVIEQ ESSPGVMIAA SIVMGRGLAP IEASISGWRL VIAARDARER
LLEYQGSLPP LTEPLPLPEP KGKLTVQNAI FQFPNSEKPL IRDVSLTINP GEVIGITGPN
AAGKSTLGKL LLGLYEPTHG DIRLDGATYA QWDRKLLGPH IGYLPQSVEL FPGTIAENIS
RFTDADPNEI MQAAQLAGVH EMILGLDNGY NFAADNFDDA LSGGQRQRIA LARAVFGLPE
LILLDEPTSS LDAEAERTVA AAIKALKEHG ATVLVIGHRP ALMNLTDKLL VMQNGSLAAF
GPTNEIMAKL VRPAVQKTGT
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