| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02254 |
|---|
| Symbol | |
|---|
| ID | 6776307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2418544 |
|---|
| End bp | 2419179 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642755688 |
|---|
| Product | heat shock protein GrpE |
|---|
| Protein accession | YP_002126544 |
|---|
| Protein GI | 196157055 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.781248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTAG GCATGAGCGA TAATCGCGAC GTGCAGGCAG AACAAGAAAA TGCAGTTGAT
GAAACTGTAC TAGGCGCAGA AGAGGCGCAG GTTGAAACGT CAGAAGCAGA AGGCGTAGAA
CTAGATGAAA ATGCACAGCG CATTTATGAA CTAGAAACCG CACTTTCTGA GGCGCAAGCA
ACCATCAAAG AACAGCAAGA TGGCGTGCTT CGTGCGCGTG CAGACGCTGA CAACGCACGT
CGTCGTGCTG AAGGTGAAGT AGAAAAGGCA CGCAAATTTG CTCTTGAACG TTTTGCGGGC
GAATTGCTTC CGGTTATCGA TAACCTAGAG CGCGCTATCG AAATGACTGA TGGCGACAAT
GAGGCCGTTA AACCGCTTTT AGAAGGTGTG GAAATGACCC ACAAAACTTT CTTAGGCACT
ATTGAGAAAT TCGGATTAAG CCTTATTGAT CCGCAGGGCG AAACCTTTAA CCCTGATTTG
CATCAGGCAA TGTCGATGCA AGAAAGTGCA GACCACGAGC CAAATACAGT GATGGCGGTT
ATGCAGAAAG GTTATCAAAT TAACGGCCGC TTGTTACGCC CTGCCATGGT TATGGTATCG
CGTGCGCCAA GCGACGGTGT GGATACGCAA GCTTAA
|
|---|
| Protein sequence | MEVGMSDNRD VQAEQENAVD ETVLGAEEAQ VETSEAEGVE LDENAQRIYE LETALSEAQA
TIKEQQDGVL RARADADNAR RRAEGEVEKA RKFALERFAG ELLPVIDNLE RAIEMTDGDN
EAVKPLLEGV EMTHKTFLGT IEKFGLSLID PQGETFNPDL HQAMSMQESA DHEPNTVMAV
MQKGYQINGR LLRPAMVMVS RAPSDGVDTQ A
|
|---|
| |