| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02249 |
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| Symbol | |
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| ID | 6775918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2411169 |
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| End bp | 2413745 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642755683 |
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| Product | sensory box/GGDEF/EAL domain protein |
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| Protein accession | YP_002126539 |
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| Protein GI | 196157050 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAC GCAGTGAACG CATGCTTTCA ACCGTGCGTG CAACTCAGAG AAGTATTGCT
GATTTACTTA ATGAAAATAG GGCAAAAACC GAAGCTCTGA GTATAGCGCT TGCCTCAATA
AACCCAAATA GCGGCCGAGC TACGGTGGTT GCAACTGATA AAAACCATAC TCTTGTAGAT
GCCGAAAGTA TTGTTTTTCC CTCTCACGTT TTACTCATGC TTCCTCTCAC ACCTTTAAGC
GCACCTATTC CCGCTAGTGA ATTTGTACTG CCTCAATCAT TTACGCAGTT TGCTGATAAT
CATATTGTTG TTGCAATGAT CAGAGACATG CAAAATGAAG TGATGGGCGT TGTACTTATA
TTTGTTTCAA ATAGCGTATT AACCGCTCAG CAGCATGACT ATATCGATAT CATGAGGCAG
AAAATTGAAG TCTGCTATCA GTATGACCTC ATTCGGCATC CGTATTCAGA CAAACTTTCA
GAACAGTTAT CACTGTTAGA AGAAGTCAGC GCTATTTCTA AAGTAGGCGC GTGGGAATTA
GACCGAGCCA CGGGAGTTTT TGCCGCAACG GAAGTAACGC GAAACCTACT GGGAATAAGG
CGCGTGAAAA GTGTGAATCT TAACGAGATT CTCGACACTA TGGTGCCGAG CGAAAGAGCC
GCGTTAAAGT ATAAAGTATT TAAAGCGATG AAAGGCGAGC GGCAGTTCGT AAGGCATATC
GATATTAAGG ACAAGCAAGG GCGCACTAAA AATGTCAAAT TGACGGTTTT TCTGCAAATT
CAGCGAATGG AGTCTGGAGC ATTAAGGCTG ACACGGCTTT TTGGCGTAAT ACAGGATGAA
ACGGACGTTC AGCGTTTATC AGATTCTCAA CACGATTATA CCGACTATGT CGTTAGTTTG
CTCAATAGCG TCGATAGTAT TGTTTTAAGC ATCGACGAGA ATGGCACCAT ATTGTCAGCT
AACGAATGTG TAACTAAAGT TTTGGGTTTC GAGCCAGACG ATTTGATAGG GCAAGACGTT
AAGCTAATTG CCACTAAGGT ACAAAATAGC GATATACCTT CTTACTTTTT GAATTTAGAT
GCGGGATTGA AAATATGCGC GGACGGCGGC GCTGTAAGAG AGTGCTTGCG GCACAAAAAT
GGCAAGCGTA TTTCCTGCGA GGTTAGTTTT ACGACGTGTA TTGTTCACGA GCAGAAGTTA
GTGGTTGCTA CAATTCGGGA TGTTACCACG CAACGTTATG AAATTGAGCA TTTTAAACAG
CTAGCGTTAA CCGACGCAGT AACAGGCCTT CCTAATTTAA ACAAGTTCGA ACACTATCTT
GCCGAAAAAG CGCATGAAGA TAAATCGGCT AAACCATTCT CGGTCTTTAT GCGGGTAAGC
GTACGTAATA TTAAAGAATA TGAGGATGCG TATGGCGAAC CTACCATCGA CTACCTTTTA
CGCATTTTAG CTAGCCGCTT TGTCCGCACA TTTGAGACAA ATAACTCAGG TAATGCCAGT
GTGTTTAAAT GCGATAGCGC TAACTTCTTT CTTCACTTGC ATCAAGACTT TAATGAAGAA
GGCCAATCTA TCAATGCTGC CAAAGCCTAT GCTCAGCTTA TACAAGAACA GGTGTTGGCA
CCTATAACGC TTCATAATAG CCTTTTAACG ATAGAAACAC AGACGATTAG CTGTACCGTG
CCTATTAAGT ATTTTTCTTT TAAAAAAATA CGCGAGCTGT TGTCACGCAA GCCCCTACGC
GAAATAAACG ATTCAAACAG CGCTTCGCTA ACGCACGACT ATTTTCATAT CAATGCAAGC
GATATTGAGC GTTACAACTA TATTAAACAC TCGCTAAGCA GAGCGATTTC AAATAACGAG
TTATTTGTGC AACTACAACC TCAATACGAT GGGCAAGGTA GTGTTATAAG CTCCGAAGTA
TTATTAAGGT GGCAACATCC ACACTTAGGA ATGGTAAAGC CCTCCGAATT TATTCCCATT
GCCGAAGAAA ACGAATTTAT CGCAGAGTTT GGGTTATGGG TTTGCAATGA AGCGTGCAGA
TTACTTAGCG ATTGCCAGTC TCAGCATATC GATACAAAAC TTTCTGTAAA TATTAGTGCC
AAGCATTTAG CGAGAGCTGA CTTTGTGAGC AAGTTTGTTG GCATAGTAAA CAGGTGGCAG
ATCTCTCACT CAAAATTAAC GTTAGAGTTG ACAGAGGGCG CGCTGATACG AGGTGTGAGC
ATTATTCAAT ATCGCGTGAG GGAGCTTGCT GAGCAAGGGT TCAGTTTGTC TATTGATGAC
TTCGGCATAG GGGATTCAAA CCTAAATTAC TTGCAAGACT TGCCTATAAA AGAGTTGAAG
GTCGACAGAG TATTTATAGA AGCAATGGAA GCATCGCAAC AAAAAACGTT ATTAGTTACC
AGTATATGTA ATATGGCCAA AGCGCTTCAT TTAGGTACGG TTGCGGAAGG AATAGAAACC
ACCCAGCAAC TCGATCAAGC AAAAGCCTGC GGTTGTAGCG CATTTCAAGG CTATTACCTC
GATAAGCCGA TGAATGTGGA AGACTGGTTT AAAAAAGTGG TAGGGCAGAA GGTGTAG
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| Protein sequence | MDLRSERMLS TVRATQRSIA DLLNENRAKT EALSIALASI NPNSGRATVV ATDKNHTLVD
AESIVFPSHV LLMLPLTPLS APIPASEFVL PQSFTQFADN HIVVAMIRDM QNEVMGVVLI
FVSNSVLTAQ QHDYIDIMRQ KIEVCYQYDL IRHPYSDKLS EQLSLLEEVS AISKVGAWEL
DRATGVFAAT EVTRNLLGIR RVKSVNLNEI LDTMVPSERA ALKYKVFKAM KGERQFVRHI
DIKDKQGRTK NVKLTVFLQI QRMESGALRL TRLFGVIQDE TDVQRLSDSQ HDYTDYVVSL
LNSVDSIVLS IDENGTILSA NECVTKVLGF EPDDLIGQDV KLIATKVQNS DIPSYFLNLD
AGLKICADGG AVRECLRHKN GKRISCEVSF TTCIVHEQKL VVATIRDVTT QRYEIEHFKQ
LALTDAVTGL PNLNKFEHYL AEKAHEDKSA KPFSVFMRVS VRNIKEYEDA YGEPTIDYLL
RILASRFVRT FETNNSGNAS VFKCDSANFF LHLHQDFNEE GQSINAAKAY AQLIQEQVLA
PITLHNSLLT IETQTISCTV PIKYFSFKKI RELLSRKPLR EINDSNSASL THDYFHINAS
DIERYNYIKH SLSRAISNNE LFVQLQPQYD GQGSVISSEV LLRWQHPHLG MVKPSEFIPI
AEENEFIAEF GLWVCNEACR LLSDCQSQHI DTKLSVNISA KHLARADFVS KFVGIVNRWQ
ISHSKLTLEL TEGALIRGVS IIQYRVRELA EQGFSLSIDD FGIGDSNLNY LQDLPIKELK
VDRVFIEAME ASQQKTLLVT SICNMAKALH LGTVAEGIET TQQLDQAKAC GCSAFQGYYL
DKPMNVEDWF KKVVGQKV
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