Gene MADE_02248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02248 
Symbol 
ID6775737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2409116 
End bp2411026 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content48% 
IMG OID642755682 
ProductPropionyl CoA synthase 
Protein accessionYP_002126538 
Protein GI196157049 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.267498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTATGA CTTATAAAAA CGAATACATT GCCTCGACCC AACATCCCGA CGAGTTTTGG 
TTAGACCAAG CGCGTAATAT TGCGTGGTTC CAGATGCCTG AGAAAGGCTG TCAAAAAACG
GATAATGGTT ATTATGAATG GTTTAGGGGA GGGCAACTCA ATACCTGTTA CCTAGCTTTA
GATCATCATG TAAAAAACGG GCGGGGAGAA AAAACAGCGT TGATTTACGA CTCGCCGGTT
ACGCAAACTA CACAACACTT CACGTTTAGC GAACTGCTTA CGCAAGTAGC ACACTTCGCC
GGCGCTTTAT CAAGTTTAGG AGTAGCTAAA GGCGACCGCG TTATTATTTA TATGCCTATG
ATCCCCCAGG CAGTTGTTGC CATGCTAGCG TGTGCACGAC TTGGCGCCAT ACACTCTGTG
GTATTTGGGG GCTTTGCCTC TAATGAACTT GCTGTGCGAA TAGATGATGC AAAGCCAAAG
GTTATTGTGA CAGCCTCATG CGGTATTGAA GGCAGCAAAG TGCTGGCTTA TAAGCCGCTG
GTGGATGAAG CGGTAACACT TGCAAGTCAC AAACCAAGCG CCTGTGTGCT TTTCCAGCGC
CCCCAGTTGC TTGCCTCCCT AAACGAAGGT ACCGACTACG ACTGGCAAGA ATTGGTTGCT
GCAAGTCAGC CCGCCGAACC GGTCGCTGTC GATGCCACCG ATCCGCTTTA TGTACTCTAT
ACCTCAGGAA CAACGGGTAA ACCTAAAGGG GTTGTTCGAG ATAACGGCGG CCATGCTGTT
GCGCTTCATT ACTCCATGGG GGCAATTTAT GGCATCAGTC AGGATGATGT GTTTTGGGCC
GCGTCTGATG TAGGTTGGGT TGTAGGGCAT TCGTACATTG TGTATGCGCC GCTCATTAAA
GGGGCAACAA CCGTACTGTA TGAAGGAAAA CCGGTAGGTA CACCAGACGC TGGTGCATTT
TGGCGAATGA TAGAAACCCA TAAAATTAAT GTGCTGTTTG CTGCGCCCAC GGCGTTTCGT
GCGATTAGAA AAGCCGATCC AGACGCCGAC TATTTATCTA AGTATGACAT CTCTAGCTTA
CGAACATTAT TTATGGCTGG CGAGCGCCTC GACCCACCCA CGTATTACTG GGCTAGCGAA
AAGGTCGGCG TGCCTGTTAT CGATCACTGG TGGCAAACAG AAACCGGCTG GCCTATATGT
TCCAACCCTA TGGGTTTAGA GCCCATGGAA ACAAAGCCTG GCTCCTCTAG CGTACCAACA
CCAGGTTTTA ACGTTAAGGT GCTTAAAGGG GGCGATGTTG AGCAGATTAA AGGAGAAAAA
GGCGCTATAG CAATACAGCT ACCTTTACCC CCGGGCTGTT TGACTACCAT ATGGCAGGAT
CATCAACGGT TCATCGATGG TTACCTGCGA GAATTTGAAG GCTACTACAG CACTGGCGAC
AACGGTTATG TCGATGACGA TGGTTATGTA TTTATTATGG GGCGAACTGA CGACGTCATA
AACGTAGCCG GGCACCGTTT ATCGACAGGC GAAATGGAAG AAGTATTAGC CGCACATCCA
GCCGTAGCCG AATGCAGTGT TATAGGCGTA CACGATGCGC TTAAGGGGCA ATTACCAATA
GGCATGTTAC TACTTAAAGA TGGTGTTGCC ATTGACGAAG AAGCACTAGA GAAGGAATTA
ATTCAACGAG TGCGAGATAC TATCGGGCCT GTGGCCTGTT TTAAGCGGGC AATTGTTGTG
AACCGGTTAC CTAAAACGCG ATCAGGGAAA ATTTTAAGAA AACTACTTCG ACAAATTGCA
GCCAATGAAA CCGTTACAGT CCCTTCTACT ATCGACGACC CTTCAAGCGT AAAAGAAATT
GAAACACTTA TGCGACAAAA AGGGCTGGTT GATGAATCTA GTATTGCTTA A
 
Protein sequence
MVMTYKNEYI ASTQHPDEFW LDQARNIAWF QMPEKGCQKT DNGYYEWFRG GQLNTCYLAL 
DHHVKNGRGE KTALIYDSPV TQTTQHFTFS ELLTQVAHFA GALSSLGVAK GDRVIIYMPM
IPQAVVAMLA CARLGAIHSV VFGGFASNEL AVRIDDAKPK VIVTASCGIE GSKVLAYKPL
VDEAVTLASH KPSACVLFQR PQLLASLNEG TDYDWQELVA ASQPAEPVAV DATDPLYVLY
TSGTTGKPKG VVRDNGGHAV ALHYSMGAIY GISQDDVFWA ASDVGWVVGH SYIVYAPLIK
GATTVLYEGK PVGTPDAGAF WRMIETHKIN VLFAAPTAFR AIRKADPDAD YLSKYDISSL
RTLFMAGERL DPPTYYWASE KVGVPVIDHW WQTETGWPIC SNPMGLEPME TKPGSSSVPT
PGFNVKVLKG GDVEQIKGEK GAIAIQLPLP PGCLTTIWQD HQRFIDGYLR EFEGYYSTGD
NGYVDDDGYV FIMGRTDDVI NVAGHRLSTG EMEEVLAAHP AVAECSVIGV HDALKGQLPI
GMLLLKDGVA IDEEALEKEL IQRVRDTIGP VACFKRAIVV NRLPKTRSGK ILRKLLRQIA
ANETVTVPST IDDPSSVKEI ETLMRQKGLV DESSIA