Gene MADE_02226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02226 
Symbol 
ID6776056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp2386547 
End bp2387137 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content43% 
IMG OID642755660 
Producttranscriptional regulator, TetR family protein 
Protein accessionYP_002126516 
Protein GI196157027 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.972925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATG ACCACGATGA AATAATCGAA AAAGCGACCA CACTTTTTTG GCAGCGAGGC 
TTTCAAGCTG CGGGTATGCG TGATATTCAA CAGGCATTAG ACATGCGCCC CGGTAGTATC 
TACGCGCGCT TTCAAAGTAA AGAAGGATTG TTCAAGCTTG TTGTGGAACG CTATGCAGAG 
AACAGCGCAA AGCGATTAAA GCAGGTGACA GAAGCAGAAT CGCCTTTAAA TGCGCTTTAT 
TGCTTTTTTG AAACAGCATT GACTGTGCCT AATGAGCAGC GCTATATGCG CCAATGCTTG 
CTAGTAAAGT CTATTGCAGA ATTAGATATC ATTGGTGATG TCGCCAAAAA AGCGGTGCTT 
GATAGTATGC AGACCCTTAA GGCTGGCTTT AGCGATATTA TTGAAGCCTG TATCGAAAAC 
GGTGAATTGC CTGCACATAC GCCAACTACA TTAGCTGCGG ACTGGCTTCA AAATCAATTC 
GTGGGTTTGC GTGCGTTCGC CTTAATGCAA GACGAAAATA AAGCCACTAT TCAAATGATC 
GACAAAGTAA TGATCGACTT AAAAGGGCAA TGGCCTCAAA AAACGCGTTA A
 
Protein sequence
MKYDHDEIIE KATTLFWQRG FQAAGMRDIQ QALDMRPGSI YARFQSKEGL FKLVVERYAE 
NSAKRLKQVT EAESPLNALY CFFETALTVP NEQRYMRQCL LVKSIAELDI IGDVAKKAVL 
DSMQTLKAGF SDIIEACIEN GELPAHTPTT LAADWLQNQF VGLRAFALMQ DENKATIQMI 
DKVMIDLKGQ WPQKTR