Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02225 |
Symbol | |
ID | 6775373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2385843 |
End bp | 2386394 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642755659 |
Product | putative alkylhydroperoxidase AhpD family core domain protein MED92 |
Protein accession | YP_002126515 |
Protein GI | 196157026 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGATT TTACATTACA TACGAAAGAC ACGGCACCGG AGGCGGCAAA GCCACTCATT GATAACTCGG TAAGTGCATT TGGCATGCTG CCCAACCTAC ATGCCGTTAT GGCAGAGGCG CCAACATTGC TAGAAGGCTA CCAAGTACTG CACAAGCTAG CGCAAGAAAC GTCGTTCAGC GCAGATGAAC TTACCGTAGT ATGGCAGTCA ATTAACGTTG AACATGCATG TCACTACTGT GTACCGGCGC ATACAGGTAT TGCAAAAAGT ATGAATGTAA GTGATACGCT AATTGAAGAG CTCCGTAACG ATGAAGTTCT TTCAGATAGC AAACTCAACA CGTTAAAAGA AACCGTACTC GCGGTAACGC GTGGTCGTGG TAATGTTGAA GAAACTCAGC TTAAGGCATT CTATGATGCT GGGTATGCGC ACAAACAGCT GTTAGAAATT ATCTTGGTAT TGGCGCAAAA AGTGATGAGT AACTACACGA ATCACCTAGC TGAAACGCCA GTAGACGAGC CGTTTAAAAA GTTTGAATGG TCGCCAAAGT AA
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Protein sequence | MNDFTLHTKD TAPEAAKPLI DNSVSAFGML PNLHAVMAEA PTLLEGYQVL HKLAQETSFS ADELTVVWQS INVEHACHYC VPAHTGIAKS MNVSDTLIEE LRNDEVLSDS KLNTLKETVL AVTRGRGNVE ETQLKAFYDA GYAHKQLLEI ILVLAQKVMS NYTNHLAETP VDEPFKKFEW SPK
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