Gene MADE_02219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02219 
Symbol 
ID6775680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp2379943 
End bp2380599 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content49% 
IMG OID642755653 
Productpredicted transcription negative regulator 
Protein accessionYP_002126509 
Protein GI196157020 
COG category[T] Signal transduction mechanisms 
COG ID[COG3806] Anti-sigma factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.279228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAATA TGAACTTTGA TGAACGCCTA GCTATTAATA CGCAGAAGCA AGAGTGGCAG 
CCGTCGCCGT CCGCTACGGT TTGGCGCAAG CCATTGGAGC GAGAAGCTAA GGAGTCGGGA 
CACACGACTA GCGTTGTGAG ATATGAGCCG GGCGCTAGCT TTAAACAGCA TAGCCATCCC 
TATGGTGAGG AGATTCTCGT ATTAGAAGGT GTATTTTCTG ACGAGCACGG TGATTATCCG 
GCGGGCACGT ATTTGCGAAA TCCTCCGGGC AGTAAACACA GCCCGTTTAG TAACGAAGGC 
TGTGTGATCT TGGTTAAACT CAATCAGTTT GATAAGCGCG ATTTAAGCGA AGTTAGGGTA 
AACACTAATA CGGCAGAGTG GCTGCAAGGG CAGGGCGGCC TACAGGTGAT GCCACTCCAC 
AATTTTGAGC ATGAACATGT AGCGCTGGTT AAATGGCCTG TTGGCGAGGT ATTTAAGCCC 
CACAAGCATT TCGGTGGAGA AGAAATATTT GTACTGTCGG GGACCTTTAA AGACGAGCAT 
GGTGAATACG CCAAGGGTAC ATGGATAAGA AGCCCGCATA TGAGTCAGCA TCATCCATAC 
GTTGACGAAG AGACCGTAAT CTGGGTGAAG ACAGGGCACT TGCCGGTGGC GTTGTAA
 
Protein sequence
MLNMNFDERL AINTQKQEWQ PSPSATVWRK PLEREAKESG HTTSVVRYEP GASFKQHSHP 
YGEEILVLEG VFSDEHGDYP AGTYLRNPPG SKHSPFSNEG CVILVKLNQF DKRDLSEVRV 
NTNTAEWLQG QGGLQVMPLH NFEHEHVALV KWPVGEVFKP HKHFGGEEIF VLSGTFKDEH 
GEYAKGTWIR SPHMSQHHPY VDEETVIWVK TGHLPVAL