Gene MADE_02166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02166 
Symbol 
ID6778755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2332508 
End bp2333689 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content46% 
IMG OID642755604 
Producthypothetical protein 
Protein accessionYP_002126460 
Protein GI196156971 
COG category[S] Function unknown 
COG ID[COG3825] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATTC AGTTTTTTTA TACACTGCGA AAGTATCAGG TTAAAACCAC GCTCCGCGAG 
TTACTTGATT TGCTCAAAGC GTTGGAGCAT CACGTGGTAT ATGCCGACAT CGAAGCTTTC
TACAGCTTGT CTCGTACCAT TATGGTGAAA GACGAAACCC AGTACGATAA GTTCGATAGG
GCATTTGCTG ATTATTTTGA AGGGGTAGAG TCTGTCGATT TGTTCGGTAA AGACATCCCA
GAAGAGTGGC TGCGTAAAGA GATTGAAAAA AACTTGAGCC CGGAGGAACG TGAAGCGCTG
CGTAAAGCTG GCGGACTTGA CGAACTTATG GACACCTTGA GAAAGCGCTT GGAAGAACAA
GAAAAGCGCC ATCAGGGGGG AAATAAGTGG GTAGGCACTG GCGGTACATC GCCGTTTGGC
GCCTATGGCG ACAACCCGGA AGGTGTACGT ATAGGTCAGA AAGGAAACCG CAAATTCTCT
GCCGTTAAGG TGTGGGATAA GCGAGAGTTT AAAAACTTAA GTTCTGATGT TGAGTTAGGT
ACGCGCAACA TTAAAGTGGC GCTTCGGAAA CTGCGTAAAT TCGCGCGCAC AGGTGCTAGC
GAACACTTAG ATGTACCTAC TACCATTGGC GAAACCGCGA AGAAAGGCGG CCTGCTTGAT
ATTCACATGG CGCCAGAGCG CCACAACGCG GTTAAAGTGT TAATGTTCTT TGATGTAGGC
GGTTCAATGG ATCCCCACGT TAAGAGTACC CAAGAGCTCT TTTCTGCCGT ACAAACCGAA
TTTAAGTACT TAGAGTACTT TTATTTTCAT AACTGTGTAT ATGAAGAGGT GTGGAAAGAT
AATTTACGGC GGGAGAAAGA GCGTATTCCT ATTTGGGATA TCATTCATCG CTACGGTAAA
GATTACAAGG TGATATTTGT CGGTGACGCC ACTATGGGGC CTTACGAAAT AACCTATCCA
GGCGGCAGCG TAGAGCATTG GAATGAAGAG CCGGGTAGTG TGTGGATGCA GCGTTTGTTG
AATCATTTTA GCAATGCCGT GTGGCTTAAT CCGCAACCTG AAAACTATTG GCCTTATTAT
TCATCTATCA AGATCATCCG AGAGATCATG GAACAGAGAA TGTATGGGTT AACCCTTGAA
GGTCTAACTG AAGCCATAAA AGGGCTAAGT CGTAGCCGTT AG
 
Protein sequence
MLIQFFYTLR KYQVKTTLRE LLDLLKALEH HVVYADIEAF YSLSRTIMVK DETQYDKFDR 
AFADYFEGVE SVDLFGKDIP EEWLRKEIEK NLSPEEREAL RKAGGLDELM DTLRKRLEEQ
EKRHQGGNKW VGTGGTSPFG AYGDNPEGVR IGQKGNRKFS AVKVWDKREF KNLSSDVELG
TRNIKVALRK LRKFARTGAS EHLDVPTTIG ETAKKGGLLD IHMAPERHNA VKVLMFFDVG
GSMDPHVKST QELFSAVQTE FKYLEYFYFH NCVYEEVWKD NLRREKERIP IWDIIHRYGK
DYKVIFVGDA TMGPYEITYP GGSVEHWNEE PGSVWMQRLL NHFSNAVWLN PQPENYWPYY
SSIKIIREIM EQRMYGLTLE GLTEAIKGLS RSR