Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02152 |
Symbol | fadE |
ID | 6775670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2317452 |
End bp | 2319914 |
Gene Length | 2463 bp |
Protein Length | 820 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642755590 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_002126446 |
Protein GI | 196156957 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0314131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGATT TTATATGGTT TTTACTGGTG GTACTGACAC TAGCGGTTGC TAGCTATCAG CGCACCAGCT TGGTAACAGC AGTTGCCATA GGCGCAGGTG TAATGATTTT AGGCACCTTA TTTGGTGACA TTGGCCTGTT AGGTTGGGTG GTGTTTCTTG CCTTAACGCT TCCTTTCACC CTTGCCAATA TCAGACAACA GTACATTTCT AAAAAGCTGT TAGCCTTTTA TCGCAAAGTT ATGCCAGAAA TGTCTAGCAC CGAACAAGAA GCAATCGACG CTGGTACCGT ATGGTGGGAT GGCGATATCT TTAGTGGTAA ACCTGACTGG GATAAGCTTC ACCGCATTCC AAAAGGTCGC CTTACTGCAG AAGAGCAAGC ATTCTTAGAC GGCCCATGTG ACAAAGTGTG CTCAATGGTT GATGAATGGC AGATTAACCA TAAAGATGCG GACCTTCCTC CTGAAATTTG GCAGTTTTTA AAAGAGCATA AGTTCTTTGC TATGATCATC AAGAAAGAAT ATGGTGGTTT AGCGTTTTCT GCGTATGCAC AATCACGTGT TCTACAGAAG CTTGCTGGCG TAAGTGCTGT ATTATCAAGC ACCGTTGGTG TACCTAATTC ATTAGGCCCC GGCGAGCTGC TTCAACACTA TGGAACAAAA GAGCAACAAG ACCACTACTT ACCTCGCCTT GCTGCGGGTG AAGAAATTCC TTGTTTTGCA CTAACAGGCC CTGAAGCGGG TTCTGATGCA GGTGCGATCC CGGATGTAGG CGTGGTATGT AAAGGCGAAT GGAATGGTGA AGAAGTGTTA GGCATGCGCC TAACGTTTAA TAAGCGCTAC ATTACGCTTG CGCCTGTGGC TACGGTTATT GGTCTTGCCT TTAAACTACA AGACCCTGAG GGCCTTCTTG GCGATAATAA AGAGCCCGGT ATCACCTGCG CACTTATTCC TCGCGATACC AAAGGCTTGG AAATTGGGCG TCGTCACCTC CCCCTTAATA CGCCATTTCA AAACGGGCCA ATTAAAGGCG AAGATATCTT CGTACCTATC GACTACATCA TTGGTGGCCC GCAAATGGCA GGTCGCGGCT GGCGTATGCT TGTTGAATGC TTGTCTGTAG GTCGCTGTAT TACGCTTCCT TCATCAGCTG CTGGTGGTGC AAAATCAGTA TCACTTGCCA CCGGTGCATA CGCACGTATT CGTCGCCAAT TCCGTATGCC TGTCGGGCAC ATGGAAGGGG TTGAAGAAAT GCTGGCGCGC ATTGGCGGTA ATGCATACTT AATGGACGGA GTCACGCGTT TCTCAACGGT TGGTGTAGAC CTTGGCGAGA AGCCGTCGGT TATCTCTGCA ATTTGTAAGT ACCACCTTAC CGAAAAAATG CGTCAGGTCA TTAACGACGC AATGGACGTT CACGGCGGTA AAGGCGTAAT GCTTGGGCCA AATAATTACT TGGGCCGCGG CTACCAGGGC GTGCCAGTGT CCATTACGGT AGAAGGTGCA AACATTCTAA CCCGTAATAT GATGATATTT GGTCAAGGTG CTATGCGCTG TCACCCTTAT GTACTTAAAG AAATTGAAGC TGCTTCAATT GAAGATAAAA AAGAAGCACT ACAAGCGTTT GATAAAGCGG TATTTGGTCA CATCGGCTTT GCTGTAGCTA ACACGGTTCG CAGTATTTGG TTCTCGTTAA CCAATGGCGC GTTTAGCAGT GCACCGTTTA CTGATGAAAC AGCCCGCTAT TACAAACTTC TTCAAGGGTA TAGCGCAAAC CTAGCGTTAC TTACCGATGT GTCTATGGGT GTACTGGGTG GCGATCTTAA ACGCCGCGAG CGTCTATCTG CGCGTTTAGG CGACATTTTA AGTGGCCTAT ACATGGGCAG CACAACGCTT AAACGCTTTG ACGAAGAGGG TCGTTTGAAA GAAGATTTAC CGCTTCTACA TTGGGCAATG CAAACCACGT TGCACGATAT TGAAACGGCA ATTGACGACT TCTTAGCGAA CTTCCCCAAC CGTGCTATCG CTGCAGCGCT TCGCGTTATG GTAATACCGT TTGGCCGTCG TATTGGCAAG CCCTCAGATA AGACAGAGCA TGCCATTGCT AAAATGCTTC AAACGCCATC CACTGCACGT AGCCGCTTAG GGTATGGGCA GTACCTAACG CGCGAAGAAG GCAGCCTATT TGGCGACCTT GAACAAACGC TTGACGATGT ATTAGCGAGC GAGCCTATCT TCGAACGCAT TTGTAAGCAT AAGAAAGCTA AACTTCCATT TACCCGTTTA GACACTCTTG CTGACGAAGC GCTTGCCGAA GAGGTGATTA ACGAAGAAGA AGCGAATCTA CTTCGCAAGA CTGAAGCCGG CAGACTTCGT ACTATTAACG TTGATGACTT TGACCACGAA GAACTGGTCG CTAAAGTTAA CTCTACCAGC GCCACGAAAA AGCGAGGTGG TAAAGCTGCT TAG
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Protein sequence | MADFIWFLLV VLTLAVASYQ RTSLVTAVAI GAGVMILGTL FGDIGLLGWV VFLALTLPFT LANIRQQYIS KKLLAFYRKV MPEMSSTEQE AIDAGTVWWD GDIFSGKPDW DKLHRIPKGR LTAEEQAFLD GPCDKVCSMV DEWQINHKDA DLPPEIWQFL KEHKFFAMII KKEYGGLAFS AYAQSRVLQK LAGVSAVLSS TVGVPNSLGP GELLQHYGTK EQQDHYLPRL AAGEEIPCFA LTGPEAGSDA GAIPDVGVVC KGEWNGEEVL GMRLTFNKRY ITLAPVATVI GLAFKLQDPE GLLGDNKEPG ITCALIPRDT KGLEIGRRHL PLNTPFQNGP IKGEDIFVPI DYIIGGPQMA GRGWRMLVEC LSVGRCITLP SSAAGGAKSV SLATGAYARI RRQFRMPVGH MEGVEEMLAR IGGNAYLMDG VTRFSTVGVD LGEKPSVISA ICKYHLTEKM RQVINDAMDV HGGKGVMLGP NNYLGRGYQG VPVSITVEGA NILTRNMMIF GQGAMRCHPY VLKEIEAASI EDKKEALQAF DKAVFGHIGF AVANTVRSIW FSLTNGAFSS APFTDETARY YKLLQGYSAN LALLTDVSMG VLGGDLKRRE RLSARLGDIL SGLYMGSTTL KRFDEEGRLK EDLPLLHWAM QTTLHDIETA IDDFLANFPN RAIAAALRVM VIPFGRRIGK PSDKTEHAIA KMLQTPSTAR SRLGYGQYLT REEGSLFGDL EQTLDDVLAS EPIFERICKH KKAKLPFTRL DTLADEALAE EVINEEEANL LRKTEAGRLR TINVDDFDHE ELVAKVNSTS ATKKRGGKAA
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