| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02146 |
|---|
| Symbol | |
|---|
| ID | 6778334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2312243 |
|---|
| End bp | 2312980 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642755584 |
|---|
| Product | Chromosomal replication initiator, DnaA like protein to DnaA protein Hda |
|---|
| Protein accession | YP_002126440 |
|---|
| Protein GI | 196156951 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0119761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTGC CTTTGCCTAT AACGTTACCC GTAGACGAAA ACTTCGATAG TTTCGTAAAT
AAGGGTAATG AAGAAGTCGT ATCAATTCTC AGGCAAATTG CAGAAGCGTT GCCATATTGG
CGAGAGGCCC CCGCATTGGG GCCGTTGTCT TCACTACAGC TTCCCCTTGT TACTTTGCTA
GGCAATAGCG CAATTGGTAA GAGCCACTTA TTATTTGCTA CTTGTCATCA ATTGGCGGGT
AAGTCTGTAA GCCACCTGTA TCTTAATTTA AACGACTACC AGGCGTGGTC GTTAGACATT
TTCGAAGGCC TTGAAAACCT TTCACTGATA GCGTTGGACA ATATCCACGC CATTGCAGGC
AATGTGCAGT GGGAAGAAGC GTTATTTGAC CTTTTTAACC GTGTTATTGA GACCAAGCGC
GCGTTGATCA TTTGCACCAG TCACCTTGGG CCATCGAACC CGGCGTTTAC GTTGCCTGAC
TTGCGCTCGC GATTAGCGTG GGGTGTGATT TACCATGTAA ATCAATTAGA TGATGGTGGG
CGTGAAGAAG CCGTGCGGCT GCGTGCTGAA GAGCGCGGGT TAACCCTTTC AAACCAAGCC
TTACAGTTTC TCTTACACCA TAGCGAACGA GACTTGAAAA GCTTGATGTC GCTACTTGCA
AGGTTAGATG CACGTTCGCT GCAAGAGCAA AAGAGACTAT CAGTAGCCAT GGTAAAACGT
GAACTTAACT TAGGTTAA
|
|---|
| Protein sequence | MQLPLPITLP VDENFDSFVN KGNEEVVSIL RQIAEALPYW REAPALGPLS SLQLPLVTLL
GNSAIGKSHL LFATCHQLAG KSVSHLYLNL NDYQAWSLDI FEGLENLSLI ALDNIHAIAG
NVQWEEALFD LFNRVIETKR ALIICTSHLG PSNPAFTLPD LRSRLAWGVI YHVNQLDDGG
REEAVRLRAE ERGLTLSNQA LQFLLHHSER DLKSLMSLLA RLDARSLQEQ KRLSVAMVKR
ELNLG
|
|---|
| |