| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02139 |
|---|
| Symbol | bcp |
|---|
| ID | 6775452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2306351 |
|---|
| End bp | 2306815 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642755577 |
|---|
| Product | thioredoxin-dependent thiol peroxidase |
|---|
| Protein accession | YP_002126433 |
|---|
| Protein GI | 196156944 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.178426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGT TACAAGCTGG TGATAAAGCG CCGCAATTCT CATTGCAGAA CCAAGATGAT
CAAACCGTAT CGCTCTCAGA CTACGCAGGT AAAAAAGTCC TCGTTTATTT TTACCCTAAA
GCAATGACGC CCGGCTGTAC TGTTCAGGCA CAAGGTTTGC GCGATGTAAA CGATGAACTA
AAAGAGAAAA ACGTAGTTGT ATTAGGTATC AGCCCCGATG CGGTAAAGCG TTTGCCGAAG
TTCATTGAGA AAGAAAACCT CAACTTCACC TTGCTGTCAG ATGAAGACCA CGCGGTGGCG
GATGCATTTG GCGTGTGGGG GCCTAAGAAG TTTATGGGCA AAGAGTACGA CGGCATTCAT
CGCCTCACTT TTCTTATCGA CGAAAACGGC GTTGTTGAGC ATGTGTTTAA TAAGTTTAAA
ACCAAAGAAC ATCACACGGT TGTGTTGGAC TATTTGAACA GCTAA
|
|---|
| Protein sequence | MKTLQAGDKA PQFSLQNQDD QTVSLSDYAG KKVLVYFYPK AMTPGCTVQA QGLRDVNDEL
KEKNVVVLGI SPDAVKRLPK FIEKENLNFT LLSDEDHAVA DAFGVWGPKK FMGKEYDGIH
RLTFLIDENG VVEHVFNKFK TKEHHTVVLD YLNS
|
|---|
| |