Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02134 |
Symbol | |
ID | 6775877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2302906 |
End bp | 2303619 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642755572 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_002126428 |
Protein GI | 196156939 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0207888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAC GCGACGAGCT TTACCGCGGT AAAGCAAAAA CTGTTTATTA CACTGATGAT AGCGATAAAT TAATTCTTCA CTTTAGGAAC GACACTTCGG CGTTCGACGG TGAAAAAATT GAACAGCTTG ATCGCAAAGG TGAAGTAAAC AACAAGTTTA ATCACTTTAT TATGACAAAG CTTGAAGAAG CAGGCGTTGC AACGCAAGTT GAAGCCCTGA TTTCTGATAC TGAGTCGCTG GTTAAAAAGC TCGACATGAT CCCTGTTGAG TGTGTGGTGA GGAACTTATC TGCTGGCTCT TTGGTTCGCA GACTAGGTGT GGAAGAAGGC CAAGCGCTTA ACCCACCTAT TTTCGAGTTT TTCCTTAAAA ATGATGCGCT TCATGACCCT ATGGTAAATG ACTATCACAT TCTGTCATTT GGCTGGGCAA CACAAGAGCA AATTGCTGAA ATGAAGGCGC TTACGTTTAA AGTGAACAAC GTTCTAAAAG CATTGTTTGA CGATGCGGGT ATGTTGCTAG TCGACTATAA ACTCGAGTTT GGTGTCGATA AAGATGGCAA CATTGTATTA GGCGATGAAT TCACGCCCGA TGGCTGTCGT TTGTGGGATA AAGAAACCCG TAAAAAAATG GACAAAGACC GCTTCAGACA AGGGCTAGGC TCGGTTGTTG AAACCTACAT TGAAGTAGCT GAGCGTTTAG GTTTATCGCT GTAG
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Protein sequence | MEKRDELYRG KAKTVYYTDD SDKLILHFRN DTSAFDGEKI EQLDRKGEVN NKFNHFIMTK LEEAGVATQV EALISDTESL VKKLDMIPVE CVVRNLSAGS LVRRLGVEEG QALNPPIFEF FLKNDALHDP MVNDYHILSF GWATQEQIAE MKALTFKVNN VLKALFDDAG MLLVDYKLEF GVDKDGNIVL GDEFTPDGCR LWDKETRKKM DKDRFRQGLG SVVETYIEVA ERLGLSL
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