Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02126 |
Symbol | nrdB |
ID | 6776121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2295615 |
End bp | 2296694 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642755564 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_002126420 |
Protein GI | 196156931 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.184341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTCG GTAACCCCGT AAACGTTGCA CGCTACGACC AGCAAAAGCA TGCCATTTTC GAAAAGCTTA TTGAGAAACA AATAAGCTTT TTTTGGCGTC CTGAAGAAGT TGACGTTTCT CGTGACCGGG TTGATTTTCA GAAGTTAACC GATCCAGAAA AGCACATATT CATTTCAAAC CTTAAGTACC AGACCCTTTT AGACTCGGTA CAAGGTCGTA GTCCGAATAT TGCGTTCTTG CCAATTATCT CACTACCCGA GTTAGAAACT TGGGTTGAGA CGTGGTCGTT TTTCGAAACG ATTCACTCGC GCTCGTATAC CCATATTTTG CGTAACCTGT TTTCAGACCC AAGTGAGATA TTTGAAGATA TCGTGGTTAA CGATGAAATT AAGCGCCGTG CGGCGGATAT TTCTAAGTAT TACGATGACC TCATTTTCGC CACTCAGCTT TGGCAGACAC AAGGTGAAGG CGTTCATACC GTTAATGGTA CGGCATACAC GATTAATATG TATGAGCTTA AAAAGAAGCT ATACCTTTGC ATGAACTCGG TAAATGCACT TGAAGCCATT CGCTTCTACG TATCTTTTGC CTGTACCTTC GCTTTTGCCG AGCGTAAGTT AATGGAAGGC AACTCTAAAA TCATTCGATT GATTGCACGC GATGAGAACC TTCATTTGTC TTCAACACAG CACATTCTTA ACCTGTGGGC GAAGGGTAAA GATGACCCTG AAATGGCGCA GATTGCACAA GAGTGCAAAG AAGAAGCGCG CGCTATTTTC ATGAATGCGG TTGAGCAAGA AAAAGAGTGG GCGGATTATT TGTTTAAAAC CGGTTCGATG ATTGGCCTAA ACAAAGAAAT CCTCTGCCAA TATGTTGAAT ATATTGCTAA TCAGCGTATG TCTGCTATTG GCCTGGACAC TCCGTTTGAT ATTAGCAGTA ATCCACTTCC ATGGATGAAC AATTACTTAA ACTCAGACAA CGTTCAAGTT GCCCCTCAAG AGTCTGAAAT TAGCTCTTAC CTTGTTGGAC AAATTGATTC TGCGGTAAGC GAAGACGACT TTGCTGATTT TGAGCTGTAA
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Protein sequence | MFFGNPVNVA RYDQQKHAIF EKLIEKQISF FWRPEEVDVS RDRVDFQKLT DPEKHIFISN LKYQTLLDSV QGRSPNIAFL PIISLPELET WVETWSFFET IHSRSYTHIL RNLFSDPSEI FEDIVVNDEI KRRAADISKY YDDLIFATQL WQTQGEGVHT VNGTAYTINM YELKKKLYLC MNSVNALEAI RFYVSFACTF AFAERKLMEG NSKIIRLIAR DENLHLSSTQ HILNLWAKGK DDPEMAQIAQ ECKEEARAIF MNAVEQEKEW ADYLFKTGSM IGLNKEILCQ YVEYIANQRM SAIGLDTPFD ISSNPLPWMN NYLNSDNVQV APQESEISSY LVGQIDSAVS EDDFADFEL
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