Gene MADE_02108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02108 
Symbol 
ID6775642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2273917 
End bp2274327 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content46% 
IMG OID642755546 
Producthypothetical protein 
Protein accessionYP_002126402 
Protein GI196156913 
COG category[N] Cell motility 
COG ID[COG5622] Protein required for attachment to host cells 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.112423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAACC ACGACAACGC CACAGCTTAC ACCTATACCA ACCACGGAAG CGCACTTGTT 
GAAGTAAAGA AATGGCACAA TGAGTTTAGC GGAGCAAGCG ATCAAGATAT TTATACGGAT
AAACCCGGTA GGCAATCGGC TCCCGCTTCG CAAGTGCCAG GTGTCGATAG CATGAATCGA
AAAGATGCCG CTGAACTTGA AGATGAACGA TTTGCCAGTG ACATTGCTGA CTGGCTAGAT
GGCGAGCGTA AACGAGGTGC GCTAGGCTCT ATAGATATTA TTAGTGGGCC AGGATTTCTA
GGGAAACTAA GAAACGGAAT GTCATCTCAA TGTTCAGAAG TCGTCGACAA AGAAGTGAAA
AAGAATGTTT TAGGTGCGGA TGAGGAAACC TTGCTTTCCT ACCTTAAATA A
 
Protein sequence
MANHDNATAY TYTNHGSALV EVKKWHNEFS GASDQDIYTD KPGRQSAPAS QVPGVDSMNR 
KDAAELEDER FASDIADWLD GERKRGALGS IDIISGPGFL GKLRNGMSSQ CSEVVDKEVK
KNVLGADEET LLSYLK