| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02085 |
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| Symbol | |
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| ID | 6775946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2251556 |
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| End bp | 2252794 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642755520 |
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| Product | prophage CP4-like integrase |
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| Protein accession | YP_002126381 |
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| Protein GI | 196156892 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00159504 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTAA CAGACATTCA AATAAAACAA GCTCAAGCAA GCACAAAGGA TATTTGGCTC
ACTGATGAGA AGGGCCTGCG CTTGCTCGTG AAAAAGAATG GCTCTAAGTA CTGGCGTCTT
AAGTATCGTT TTCAGGGAAA ACAAAAGACA TTGGCAATTG GGGTTTACCC AGAGGTGTCA
CTAAAGGATG CACGAGAAGC AGTTTCAGAA GCTAGAAGAC AATTAAGAGA TGATATTGAC
CCTAGCGCTA TAAAGCAGGA AAAGAAGCAC CTTTCTTCTG TAAGCGAAAT AGAACTGTTT
AACACTCAAG CACGGCTTTG GTGGAATAAG CAAAAGGGCC AGTGGAGCGA GGGCCATGCT
GCCCGAATTT GGACACGCTT AAATGATAAT GCGTTAAAGA CGCTAGGCAA GCGGCCCATT
GGTGAAATCA CACCTCAAGA CATAATTAGA ACCGTTCAAA AAATAGAAAC GCGTGGAGCG
CTCGATGTTG CTCAAAGAGT ACTTCAAGAC ATTAGGCGCG TTTGTCGTTT CGCTGTACAG
ACTGGCGTTC TACTCCATAA CCCTGCTTCT GAGTTATCAG GAATACTGGA AAAGCGTAAA
ACATCGCATA GGGCCTCATT ACCAAGGGAA GAATTACCAC AGTTTCTACG TGATTTAGAT
GCTTACCACC AGCAAGGCCG CTTACTTACC AAGCTAGCTA TTGAACTGTT GGTACACACT
TTTGTAAGAC CTGGTGAGTT AGCCGGTGCC CGTTGGGATG AATTCGACTT AGAAGAAAAG
CTATGGCGCA TACCAGCGCA TAGAATGAAA ATGAAGTCTG ATCACATCGT GCCACTTTCT
AGGCAAGCAC TTGCAGTATT AGAAAACACC AAGCCGTTCA GCGCTCGTTT CGAGTTCGTT
TTTCCTTCTG AAAGAGATAG GTTTAAGCAA ATGTCTGACA ATACTATGCG GATGGCTATT
TTTCGCATGG GCTACGATGG TGAAACTAAA GGCAAAAGCA AGGCTAACCC ACATGGGTTC
CGTGCTACTG CATCTTCAAT ACTAAATGAA ACTGGCTTTA ACCCAGACGC AATAGAGCGT
CAGCTTTCAC ATATGGAAAG GAATGGGGTT AGAGCTGCTT ACACGCACCA TGCTCGTTAC
TTAGAAGAAC GTAAAGAAAT GATGCAATGG TGGAGTGATT ACTTAGATAG TCTTAAGAAT
AACGGTAACG TTACGCCCAT TTTTAAAAAA CAAGCCTGA
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| Protein sequence | MPLTDIQIKQ AQASTKDIWL TDEKGLRLLV KKNGSKYWRL KYRFQGKQKT LAIGVYPEVS
LKDAREAVSE ARRQLRDDID PSAIKQEKKH LSSVSEIELF NTQARLWWNK QKGQWSEGHA
ARIWTRLNDN ALKTLGKRPI GEITPQDIIR TVQKIETRGA LDVAQRVLQD IRRVCRFAVQ
TGVLLHNPAS ELSGILEKRK TSHRASLPRE ELPQFLRDLD AYHQQGRLLT KLAIELLVHT
FVRPGELAGA RWDEFDLEEK LWRIPAHRMK MKSDHIVPLS RQALAVLENT KPFSARFEFV
FPSERDRFKQ MSDNTMRMAI FRMGYDGETK GKSKANPHGF RATASSILNE TGFNPDAIER
QLSHMERNGV RAAYTHHARY LEERKEMMQW WSDYLDSLKN NGNVTPIFKK QA
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