Gene MADE_02058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02058 
Symbol 
ID6775467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2228734 
End bp2229075 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content47% 
IMG OID642755493 
ProductCytochrome c oxidase, cbb3-type, subunit III 
Protein accessionYP_002126354 
Protein GI196156865 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00379379 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGCAT GGCTTGATGC TATGGGTGAA GACGGTATCG AAGAAGTCGT TAACTATGTA 
CTTAGCTTAA GCGGTCGCGA TGTAGACCCA CAGCTTGCTG AAGCGGGTAA AGCGCGTTTC
GCAGCATGTG CGGCATGTCA CGGTATGGAC GGTAAAGGTA ATCAGGCACT AGGTGCACCA
AACCTTACTG ACAATATCTG GCTATACGGC GGCAGCCACA GAGCGGTCAC TGAAACACTA
ACTTATGGTC GTAACGGTGT AATGCCTTCA TTCAAGAAAA CCTTGGGTGA TGATAAAATT
CACGTAGTTG CGGCGTACGT TTACAGCCTT TCAAATGATT AA
 
Protein sequence
MHAWLDAMGE DGIEEVVNYV LSLSGRDVDP QLAEAGKARF AACAACHGMD GKGNQALGAP 
NLTDNIWLYG GSHRAVTETL TYGRNGVMPS FKKTLGDDKI HVVAAYVYSL SND