| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02040 |
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| Symbol | |
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| ID | 6775479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2212565 |
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| End bp | 2213803 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642755475 |
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| Product | site-specific recombinase, phage integrase family protein |
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| Protein accession | YP_002126336 |
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| Protein GI | 196156847 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.751344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCATCA CTAAACCTAC ACCGTTGTTT CCCACGTATA CTGAGCTGGC AGAACTCAAT
TTATCTGACT ATCCACAACT AAGTTCATTC TTAGATAAGC AACCAACATG GATTAGACAG
CACTGGGACT GGGCAAAAGA TTACCTTTTG TATATCGGTC GCAACAAATC ACAACACACG
TATGTGCGTT TTCGAAATGA CATCGAAAAG TTTCTACTGT GGGTCTTCAT GGTGGATAAG
CAGCCAGTGG ACGATTTACG CAAAGCAGAT ATTTTGCGAT ACATTGATTT TTGTGTGGCG
CCACCGGTTA AATGGATAAG TACGCAGCTC CATGACCGAT TTAGCTTCAA AAACGGATAC
TTTGCTTCAA ACCTTAAGTG GACGCCGTTC AGGCAAACGC CGCCCAAATA CGATAAAGAT
AGAGTGCTCG ATCCGAAAAA GTACCAACCG TCATTGCAGA CCCTAGAATC TACCTTTGTG
GCATTAAGCT CTTTTTATCG CCATCTCATC GATGAAGAAA TTTGTTTCGG CAATCCTATT
CCATTAGCAA AACGTGACTG TAAATATATG ATAAAAGACA GTCAGGTGAA AACTATCAGT
CGATTAACAG AACAGCAATG GCAATATCTC CTAGATACCG CAGTTGAAAT GGCTGATAAC
GATCCGCTTG TGGAACGCAA TTTATTCGTT ATTGCTACCA TGAAAACCCT ATTTCTGAGA
CTTTCAGAGC TCTCAGAACG CCAAGACTGG ACACCGTTGA TGAGTCATTT TTGGACAGAT
GAGGACAACA ACTGGTGGTT TAAGACCTAT GGAAAAGGCA AAAAGATTAG AGATATCACG
GTACCACCGG GTTATCTTAC GTTTTTGAAA CGATATAGAG AATGGCGTGG ACTGTCACCG
TTGCCATCCA AAGGTGAACA AACCGTGTTG GTCGAAAAAA TACGAGGTCG TGGAGGTTTA
ACAAGCCGTC AAATATCCAG GCTCGTGCAG CAAGTATTTG ACGCAGCTTT CGATAAGATG
AAGTCAGAAC AAGGAGTAGA AGCCGCACAG AAATTAAATG AAGCAACGAC ACATTACTTG
CGTCACACCG GTGCCAGCAT GGAGATTGAA CGTGACAGGC CTTTGAAAGA TTTATCTGAG
GATCTAGGTC ATTCAAGTAG TGCGACCACT GACACAGTTT ATGTGCAAGT GGAGCGAAAA
CGCCGAGCAG CATCAGGTAA AGATAGAAAA GTTCAATAG
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| Protein sequence | MAITKPTPLF PTYTELAELN LSDYPQLSSF LDKQPTWIRQ HWDWAKDYLL YIGRNKSQHT
YVRFRNDIEK FLLWVFMVDK QPVDDLRKAD ILRYIDFCVA PPVKWISTQL HDRFSFKNGY
FASNLKWTPF RQTPPKYDKD RVLDPKKYQP SLQTLESTFV ALSSFYRHLI DEEICFGNPI
PLAKRDCKYM IKDSQVKTIS RLTEQQWQYL LDTAVEMADN DPLVERNLFV IATMKTLFLR
LSELSERQDW TPLMSHFWTD EDNNWWFKTY GKGKKIRDIT VPPGYLTFLK RYREWRGLSP
LPSKGEQTVL VEKIRGRGGL TSRQISRLVQ QVFDAAFDKM KSEQGVEAAQ KLNEATTHYL
RHTGASMEIE RDRPLKDLSE DLGHSSSATT DTVYVQVERK RRAASGKDRK VQ
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