| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02029 |
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| Symbol | |
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| ID | 6775511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2195418 |
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| End bp | 2198552 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755464 |
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| Product | putative RND efflux system protein |
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| Protein accession | YP_002126325 |
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| Protein GI | 196156836 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.517154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCAC GAATACTCCG TCTATCCATT GAGCGCCGTG GTGTCATGAT GTTGTTCGCC
TTGTTTGTCG CCTTTTTTGG TATGTACAGT TACAAACAAC TGCCGATTGA TGCTGTGCCT
GATATCACCA ACGTGCAAGT GCAGATAAAT ACCGCAACCC CAGGTTACTC GCCTTTGGAG
ACTGAGCAAC GCATAACGTT TATAGTTGAA ACCTCGCTGG CCGGTTTGCC TAATTTATCG
TATACCCGCT CGATATCACG CTATGGCTTG TCGCAAGTCA CAGTCGTGTT TAAAGAGGGC
ACCGATTTAT ATTTCGCACG AAATCTCGTC AACGAGCGTC TCACCGCCAT CGCGGCGCAA
TTGCCAACAG GGTTAACCCC TGAAATGGGC CCTATCGCCA CAGGCTTGGG TGAAATTTAC
ATGTACTCGT TAAGTGCTGA GCCTCAGGCG CGACAGGACA ACGGTCAACC CTATGATGCT
ATGGCATTAA GGGAGATCCA TGATTGGGTA GTTAAGCCCC AATTGTCGCT TGTTGAGGGG
GTGACCGAGG TTTATGCGAT AGGCGGATTT GAAAAGCAAT ATCATGTGAA TCCTAATCCA
GTCGCAATGA TAAACTTTGG GATAAGTACA GGTGACCTTC TCAGTGCGCT AGAACGCAAC
AATGCGAATC AAGGCGCTGG TTTTGTAGAA CAAAATGGGC AACAAGTACT GATCAGATCG
GAAGCCCAAC TGAAGGGCAT CGACGATATC GGCCAAGTGG TTGTTAAGAT CATTGATGGC
GTACCGGTAA AAATTCAAGA CATCGCCCAA ATCAACCTCG GTAAAGAGCT GCGCTCTGGA
GCCGGCACGT TAAATGGCCA AGAAACAGTG ATTGGCACGA CAATGATGTT AGTGGGAGAA
AACTCTCGTA CGGTCGCCAA AGCTGTGGAC AGTAAGCTCG AAACCATTAA AACAAGCTTA
CCCGAGGGCG TTATCCTTGA AGCGGTTTAC GATAGAACAA GCCTCGTTGA CAAAACCATC
GACACAGTAC AGAAAAACCT CGTCGAGGGC GCTTTACTTG TCATCGTTGT GCTATTCGTT
TTGCTTGGGA ATGTGCGAGC TGCACTTATT ACAGCCGCTG TAATACCCAT GGCAATGCTT
GCCACGATAT CGGGTATGGT CAAAACCGAT GTGTCTGCTA ACTTAATGAG TTTAGGCGCA
CTGGATTTTG GCTTGATTGT CGATGGCGCA GTTATCATTG TTGAAAACTG TATCAGACGA
TTATCCGAAT CCCAGAAACA AAACGGCGCT ACTCTACCGC TCAAAGAAAG GCTGAATGTT
GTTTATGAAG CCACTAATGA AGTCATACGT CCCAGTTTGT TTGGTGTATT GATCATTACC
ATTGTTTATA TCCCCTTGTT CACGCTCACT GGCGTCGAAG GTAAAATGTT CCACCCCATG
GCAGCGACCG TGATAATGGC TTTGCTTGCC GCAATGGTAT TTTGTTTTAC CGTAGTGCCT
GCGGCGATAG CAATTTTCAT GAGAGGTAAA ATTAGCGAAA AAGAAAGCCC AATTATTAAA
GGTGCAAAGG CAGTCTATCG TCCTGTTTTA ACCGGAGCGC TGCGTTTTAG ATGGCTAGTG
GTAGTAGCAG CGAGTGCTTT GGTTGTCGGC AGTTTATGGA TGGGCAGTAA ATTAGGCTCG
GAGTTTATTC CTCAGCTCAA TGAAGGTGAT ATCTTAGTAC AGGCGATACG CATCCCTGGG
ACAGGGGTAG AACAAGCAGT TGAAATGCAA AAAACTCTTG AAGCGAAACT TATGCAGTAT
GAGCAAGTAC AGACGGTATT CGGTCGCACG GGTACGGGTG AGGTCGCCAC CGACCCTATG
CCACCAAACA TTACTGATAC GTTTGTTATT TTAAAGCCTA GGGAGCAATG GCCCGATCCA
TCAATGACAA AAGCTGAGTT AGTGAAAACG TTTGAAGAGG ACTTGTTTAC TTTGCCCGGC
AATAATTATG AATTTACGCA ACCTATACAA ATGCGTTTTA ACGAATTGAT TAGTGGCGTA
AGGGCAGATT TGGGGATAAG GCTATTTGGG GATGACTTAG ATACGCTCTT TGCATCTGCT
TCTGACATTT TGACCGTTAT TTCAACGATT GAAGGGGCTG ATGACGCGAG GCTTGAGCAG
GTAGAAGGCA TTCCAATCTT CACCGTCACA CCAAAGCCTG ATCAATTGGC ACGCTTTGGT
TTGGATATAG CCGACTTGCA GTTATGGCTC AATGCTGCGA CAGGTGGAGA AACCGCTGGA
ATGATTTTTG AGGGCGACAG ACGCTTTAAA ATTGTCGTGC GATATGCCGA CGACATTCGA
AATGAACTCA CTCAGCTTGA GACCATTCCC ATAGTCACGC CCTCTGGTGA GCATGTACCA
ATGAGCGAAT TAGCCACACT TGCATTTAAA GAAGTACCTA GCCAAATAAG CCGGGAAAAT
GGCAAACGTA GTATTGTTGT CACAGCAAAT GTGCGTGACA GAGATATTGG CACTTTTGTT
GAGGAAGCTC AGGCGAGAAT TAATGATGAA GTAAATTTAC CTGCTGGTTA TTGGCTCGAC
TATGGTGGAA CCTTTGAGCA GCTCGAAAGT GCGAGTCAAC GATTGACGAT TGTGGTACCG
GTTACGTTGT TTGTGATTTT GACTATGCTG GTAATTGCGT TTGGTTCAAT ACGTGATGCG
TTAATTATCT TCACAGGTAT CCCTTTGGCA TTAACAGGCG GTGTAATGTC TCTTTGGTTA
AGGGATATGC CTTTATCCAT ATCCGCGTCG GTAGGGTTTA TCGCACTGTC TGGGATTGCC
GTATTAAACG GATTGGTAAT GCTGTCATTC ATCAAGCAAC GTTTGCTAGA AACCGGAGAA
TTAGTGAATA GCATTGTTGA AGGGGCTCTT ATTCGCTTGC GTCCGGTATT AATGACAGCA
TTAGTTGCAA GCCTTGGATT TGTGCCCATG GCGCTGAATA CGGGCATAGG TGCAGAAGTG
CAAAGACCGT TGGCCACTGT TGTGATTGGC GGCATTTTGT CCTCGACACT GCTTACTTTG
GTTGTTCTAC CAGTTCTCTA CAGAATTGTG TATGGGAGAC ATCTAACTAA ATTGACGATT
AATCACGCTA GTTAA
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| Protein sequence | MIARILRLSI ERRGVMMLFA LFVAFFGMYS YKQLPIDAVP DITNVQVQIN TATPGYSPLE
TEQRITFIVE TSLAGLPNLS YTRSISRYGL SQVTVVFKEG TDLYFARNLV NERLTAIAAQ
LPTGLTPEMG PIATGLGEIY MYSLSAEPQA RQDNGQPYDA MALREIHDWV VKPQLSLVEG
VTEVYAIGGF EKQYHVNPNP VAMINFGIST GDLLSALERN NANQGAGFVE QNGQQVLIRS
EAQLKGIDDI GQVVVKIIDG VPVKIQDIAQ INLGKELRSG AGTLNGQETV IGTTMMLVGE
NSRTVAKAVD SKLETIKTSL PEGVILEAVY DRTSLVDKTI DTVQKNLVEG ALLVIVVLFV
LLGNVRAALI TAAVIPMAML ATISGMVKTD VSANLMSLGA LDFGLIVDGA VIIVENCIRR
LSESQKQNGA TLPLKERLNV VYEATNEVIR PSLFGVLIIT IVYIPLFTLT GVEGKMFHPM
AATVIMALLA AMVFCFTVVP AAIAIFMRGK ISEKESPIIK GAKAVYRPVL TGALRFRWLV
VVAASALVVG SLWMGSKLGS EFIPQLNEGD ILVQAIRIPG TGVEQAVEMQ KTLEAKLMQY
EQVQTVFGRT GTGEVATDPM PPNITDTFVI LKPREQWPDP SMTKAELVKT FEEDLFTLPG
NNYEFTQPIQ MRFNELISGV RADLGIRLFG DDLDTLFASA SDILTVISTI EGADDARLEQ
VEGIPIFTVT PKPDQLARFG LDIADLQLWL NAATGGETAG MIFEGDRRFK IVVRYADDIR
NELTQLETIP IVTPSGEHVP MSELATLAFK EVPSQISREN GKRSIVVTAN VRDRDIGTFV
EEAQARINDE VNLPAGYWLD YGGTFEQLES ASQRLTIVVP VTLFVILTML VIAFGSIRDA
LIIFTGIPLA LTGGVMSLWL RDMPLSISAS VGFIALSGIA VLNGLVMLSF IKQRLLETGE
LVNSIVEGAL IRLRPVLMTA LVASLGFVPM ALNTGIGAEV QRPLATVVIG GILSSTLLTL
VVLPVLYRIV YGRHLTKLTI NHAS
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