Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02018 |
Symbol | |
ID | 6776512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2184861 |
End bp | 2186168 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642755453 |
Product | predicted membrane protein |
Protein accession | YP_002126314 |
Protein GI | 196156825 |
COG category | [S] Function unknown |
COG ID | [COG4325] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.439665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCCC CAATTACCGT AGACAAATTA AGATTTCTCA TTTACAGCTT TAAAGAGAAG TTGTGGTTAA AGCCGCTTGT ATTTTGTGTG CTATCACTTA TCGCTGTATT TATCGCAAAA GTTGTCGACG GCACGTCAGT TGCTGAACAT ATTCCTGAAA TAAAGTCTGA GTCGGTAGAG ACATTACTGT CAATCATGGC GTCTAGCATG ATGGTAATTG CCACATTCTC TGCAGGAACT ATGGTTAACG CCTATGCTTC AGCCAGCCAA TCTTCAACGC CGCGCTCGTT AAGCCTAATT ATTTCCGATG ACGTTTCACA AAATGCACTG TCTGTTTTCA TTGGTGCATT CATTTATAGT GCTGTTGGCA TTACTGCTAT AAGCCACGCT TTTTTCGAAA AAGCTGGGGT CTTTATCTTA TTTTGTTTAA CGTGTTTGGT CTTCGCTGTT GTTATTTTAA CCTTTATACG TTGGGTAGAC AGCGTGGCTC GATTGGGCCG TGTCGGCTCC ACGTTACTAA AAGTTGAACA CGCCACTGGG CGCGCCATAA GCAATAGAAT TGAAGCGCCA TGTTTAGGTG CAGTGCCGCA AGATGAAATA AAAGAGCAGG GGAGTCATGC CATTTACACG AATGAGGTTG GCTATATTCA ATTAATTGAT ATCGCAAAAC TGCACAAGTG GGCCCAAACC AATGGTAACT TTGTAAATGT GGCCATGCTT CCGGGGGAAT TTGTTACACC CGATAAGCCC ATCGCGTTCG TAAAGTATAA TGCAGATTTC GAAGACATTA TCAGCGCTTT TAAAATAGGC GAAGCTCGCT CTTTCGAAGC TGACCCGCGC TTCGGCTTTA TTGTTTTGGC AGAAATTGCA TCTCGTGCTT TATCGCCATC GGTAAACGAT CACGGTACGG CTATTAACGC CATTAGCAGT ATTACGCGGC TTTTACTTAT CTGGTATAAA AATGCCGAAC AAGATAGTCG TCAAAACGAG CGTAAAAACA TTAAGCCTAA AACTCAAGAT AACGGCAAAC CACATTATAA GTATGATGCC GTATCTGTCC CGGCATTAAA TGTAGATGAC TTGTTTGATG ATGCTTACAC CAGTATAGCG CGCGATGGCG CGGCTAACAT TGAAGTAGCG ATACGTATTC AAAAGTCACT TAATACGATA AAAGCCTGTT TTGATCGCGT AGATAACACG TTTGTTAAGG CCGCCAATAA ATTAGCAATA CAAAGCTACG AACGCAGTAA AATGGCGCTA AGCTACGAGG AAGATGTTAA GCGATTAGAC AAGGTTTTTA AAAATTAG
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Protein sequence | MEAPITVDKL RFLIYSFKEK LWLKPLVFCV LSLIAVFIAK VVDGTSVAEH IPEIKSESVE TLLSIMASSM MVIATFSAGT MVNAYASASQ SSTPRSLSLI ISDDVSQNAL SVFIGAFIYS AVGITAISHA FFEKAGVFIL FCLTCLVFAV VILTFIRWVD SVARLGRVGS TLLKVEHATG RAISNRIEAP CLGAVPQDEI KEQGSHAIYT NEVGYIQLID IAKLHKWAQT NGNFVNVAML PGEFVTPDKP IAFVKYNADF EDIISAFKIG EARSFEADPR FGFIVLAEIA SRALSPSVND HGTAINAISS ITRLLLIWYK NAEQDSRQNE RKNIKPKTQD NGKPHYKYDA VSVPALNVDD LFDDAYTSIA RDGAANIEVA IRIQKSLNTI KACFDRVDNT FVKAANKLAI QSYERSKMAL SYEEDVKRLD KVFKN
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