Gene MADE_02018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02018 
Symbol 
ID6776512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2184861 
End bp2186168 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content42% 
IMG OID642755453 
Productpredicted membrane protein 
Protein accessionYP_002126314 
Protein GI196156825 
COG category[S] Function unknown 
COG ID[COG4325] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.439665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCC CAATTACCGT AGACAAATTA AGATTTCTCA TTTACAGCTT TAAAGAGAAG 
TTGTGGTTAA AGCCGCTTGT ATTTTGTGTG CTATCACTTA TCGCTGTATT TATCGCAAAA
GTTGTCGACG GCACGTCAGT TGCTGAACAT ATTCCTGAAA TAAAGTCTGA GTCGGTAGAG
ACATTACTGT CAATCATGGC GTCTAGCATG ATGGTAATTG CCACATTCTC TGCAGGAACT
ATGGTTAACG CCTATGCTTC AGCCAGCCAA TCTTCAACGC CGCGCTCGTT AAGCCTAATT
ATTTCCGATG ACGTTTCACA AAATGCACTG TCTGTTTTCA TTGGTGCATT CATTTATAGT
GCTGTTGGCA TTACTGCTAT AAGCCACGCT TTTTTCGAAA AAGCTGGGGT CTTTATCTTA
TTTTGTTTAA CGTGTTTGGT CTTCGCTGTT GTTATTTTAA CCTTTATACG TTGGGTAGAC
AGCGTGGCTC GATTGGGCCG TGTCGGCTCC ACGTTACTAA AAGTTGAACA CGCCACTGGG
CGCGCCATAA GCAATAGAAT TGAAGCGCCA TGTTTAGGTG CAGTGCCGCA AGATGAAATA
AAAGAGCAGG GGAGTCATGC CATTTACACG AATGAGGTTG GCTATATTCA ATTAATTGAT
ATCGCAAAAC TGCACAAGTG GGCCCAAACC AATGGTAACT TTGTAAATGT GGCCATGCTT
CCGGGGGAAT TTGTTACACC CGATAAGCCC ATCGCGTTCG TAAAGTATAA TGCAGATTTC
GAAGACATTA TCAGCGCTTT TAAAATAGGC GAAGCTCGCT CTTTCGAAGC TGACCCGCGC
TTCGGCTTTA TTGTTTTGGC AGAAATTGCA TCTCGTGCTT TATCGCCATC GGTAAACGAT
CACGGTACGG CTATTAACGC CATTAGCAGT ATTACGCGGC TTTTACTTAT CTGGTATAAA
AATGCCGAAC AAGATAGTCG TCAAAACGAG CGTAAAAACA TTAAGCCTAA AACTCAAGAT
AACGGCAAAC CACATTATAA GTATGATGCC GTATCTGTCC CGGCATTAAA TGTAGATGAC
TTGTTTGATG ATGCTTACAC CAGTATAGCG CGCGATGGCG CGGCTAACAT TGAAGTAGCG
ATACGTATTC AAAAGTCACT TAATACGATA AAAGCCTGTT TTGATCGCGT AGATAACACG
TTTGTTAAGG CCGCCAATAA ATTAGCAATA CAAAGCTACG AACGCAGTAA AATGGCGCTA
AGCTACGAGG AAGATGTTAA GCGATTAGAC AAGGTTTTTA AAAATTAG
 
Protein sequence
MEAPITVDKL RFLIYSFKEK LWLKPLVFCV LSLIAVFIAK VVDGTSVAEH IPEIKSESVE 
TLLSIMASSM MVIATFSAGT MVNAYASASQ SSTPRSLSLI ISDDVSQNAL SVFIGAFIYS
AVGITAISHA FFEKAGVFIL FCLTCLVFAV VILTFIRWVD SVARLGRVGS TLLKVEHATG
RAISNRIEAP CLGAVPQDEI KEQGSHAIYT NEVGYIQLID IAKLHKWAQT NGNFVNVAML
PGEFVTPDKP IAFVKYNADF EDIISAFKIG EARSFEADPR FGFIVLAEIA SRALSPSVND
HGTAINAISS ITRLLLIWYK NAEQDSRQNE RKNIKPKTQD NGKPHYKYDA VSVPALNVDD
LFDDAYTSIA RDGAANIEVA IRIQKSLNTI KACFDRVDNT FVKAANKLAI QSYERSKMAL
SYEEDVKRLD KVFKN