| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02016 |
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| Symbol | |
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| ID | 6775718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2181716 |
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| End bp | 2183140 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642755451 |
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| Product | DNA photolyase |
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| Protein accession | YP_002126312 |
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| Protein GI | 196156823 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0782959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATTC CTGTAAGCAT TATGTGGTTT AGACAAGACC TTCGCGTAAA AGACAACCCT
GCATTGAATG CAGCGTGTGA CATGGGAAAA ATCGTTCCCA TCTACATATT TGATGAAAGT
GCGCCAGATG GCAGAATGCC TGGCGGTGCA AGCAAGTGGT GGCTTCACCA TTCGTTAAAA
TCTTTAAACA AACGGCTGAA CGGTCATCTA CAAATTTTTA AAGGCGATCC ACAAACTCTC
ATTCCAAAGC TTATGGAGTC CTTTAATGCA TCGTCTATCT TTTGGAACCG GTGTTACGAG
CCATGGCAAA TTAACCGTGA CAAAGCCATT AAAAAGTCAC TTCTAGGTAG TGACTACGAG
GCGCATAGCT TTAACGGTAG TTCATTGTGG GAGCCAATGA AGGTACTCAA AAAAGATGGC
ACGCCTTATC GAGTTTTTAC CCCTTACTAC AAAAATGGCT GTCTACAGAT TGAAGAGCCA
CGCTACCCGA AGGCACCTCC AGCACGTATT ACCTATGCAG ATGTTGACGA TAACAGCGAT
GGCTTAGCCG CGTTAGCGTT GCTTCCGACC ATAAAATGGG ATGACACCAT TGCCAAGGAG
TGGACGCCTG GCGAAGATGG CGCGGCAGAT AATCTGTCTG ACTTTATTGA AAACTCAGCA
CGAAGGTATA AAGACGGCAG AGACATTCCT TCGGCGAAAG GAACTTCACG ACTGTCACCG
CATTTACATT TTGGCGAAGT GTCACCAAAC CAAGTTTGGT ATGCCATAAA AGATAGGTTC
GGGACTAGCG AAGACAAAAG TATCGAGACT TATCTCAGTG AACTTGGTTG GCGAGAATTC
AGCTATTACC TTCTGTTTCA CTTTCCTACG CTACCGAATA AAAACTTCAA CGATAAGTTT
GATAAATTTC CATGGCGTAC TGACGCAAAA GCGCTAAAAG CGTGGCAAAC CGGTAATACA
GGAATTCCTA TTGTTGATGC GGGTATGCGT GAACTGTGGC AAACAGGCTA CATGCACAAC
CGCGTTCGCA TGATTGTGGG GTCATTTTTA GTCAAAAATT TGTTATTGAG CTGGCATGAA
GGTGAACGCT GGTTTTGGGA TACCTTACTT GATGCCGACT TAGCCAGTAA TAGCGCTAGT
TGGCAATGGG TAGCAGGCTC AGGGGCAGAT GCCGCACCGT ACTTCAGAAT TTTTAATCCC
ATCCTCCAAG GTGAAAAGTT TGATAAGAAA GGCGGCTATG TTCGTCAATA TTGCCCCGAA
CTAAATGGAC TGTCTGATAA ATACATCCAC AAGCCCTGGG AAGCACCATC TGCTATATTG
AAAGAGGCGG GTGTTGAGCT TGGTAAGGAT TACCCTAAGC CTATTGTTGA TTTAAAGGCA
TCACGCCAGC GAGCACTAGA CGCGTTTCAA ACATTAAAAG AGTAG
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| Protein sequence | MTIPVSIMWF RQDLRVKDNP ALNAACDMGK IVPIYIFDES APDGRMPGGA SKWWLHHSLK
SLNKRLNGHL QIFKGDPQTL IPKLMESFNA SSIFWNRCYE PWQINRDKAI KKSLLGSDYE
AHSFNGSSLW EPMKVLKKDG TPYRVFTPYY KNGCLQIEEP RYPKAPPARI TYADVDDNSD
GLAALALLPT IKWDDTIAKE WTPGEDGAAD NLSDFIENSA RRYKDGRDIP SAKGTSRLSP
HLHFGEVSPN QVWYAIKDRF GTSEDKSIET YLSELGWREF SYYLLFHFPT LPNKNFNDKF
DKFPWRTDAK ALKAWQTGNT GIPIVDAGMR ELWQTGYMHN RVRMIVGSFL VKNLLLSWHE
GERWFWDTLL DADLASNSAS WQWVAGSGAD AAPYFRIFNP ILQGEKFDKK GGYVRQYCPE
LNGLSDKYIH KPWEAPSAIL KEAGVELGKD YPKPIVDLKA SRQRALDAFQ TLKE
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