| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01983 |
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| Symbol | |
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| ID | 6779216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2141285 |
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| End bp | 2142124 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642755419 |
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| Product | MscS Mechanosensitive ion channel ei VT8 |
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| Protein accession | YP_002126281 |
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| Protein GI | 196156792 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.865643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGATT TCTTCGGGAC TAATATCGAT TTATCGGAAT TAACCGAAAA AGCGATATCA
CTGGTGATGA CTTATACCCC CAAATTGCTA TTGGCTATTC TTACTTTGGT GGTGGGTCTC
TGGTTAGTGA ATCGTTTTGT AAACCTATTG GATCACCGAT TAGGTAAAAA GGACCCCACG
TTAAATAAGT TTTTATGCGG ACTTATAAGC GCCGTTTTAA AAGTGATGTT GTTGATTTCT
GTTGCCTCTA TGATAGGTAT TGAAACCACC TCATTTATCG CCGTAGTGGG TGCAGCAGGT
TTGGCAATCG GTCTTGCATT ACAAGGCAGC CTGGCTAATT TTGCTGGCGG TGTGCTAATA
CTGATCTTTA AACCCTTCAG AGTGGGTGAC ACCATTGAAG CAGAAGGTTA TCTCGGGTCG
GTTGCCGAGA TACAAATTCT TTATACGGTA CTTAACACTT TCGACAATAG GCGTGTTGTT
ATCCCCAACG GTAATCTGTC TAATGCCACG TTGACTAACG TTAGCGTATA CGATAAACGC
CGCTGCGACA TGACATTTGG TATTGGCTAC GATGATGATA TCGACAAAGC AAAGAAAATT
TTGCAACGTC TGTTTGAAGA GGATGAACGC TCATTGACCG AACCTGCACC TAGGATCTGT
GTAGGGGGAT TAGGTGATAA CTCGGTCGAC CTGATGTTTA GACCTTGGGT CGGCACAGAT
GATTTGTGGC CTTACTACTG GGATATGCAG GAAAAAGTTA AAAAAGCCTT CGATGAAGAA
GGTATTAGCA TCCCTTATCC GCAGCGAGAT GTACATCTGT ATAACGCAAG TAACGATTAA
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| Protein sequence | MEDFFGTNID LSELTEKAIS LVMTYTPKLL LAILTLVVGL WLVNRFVNLL DHRLGKKDPT
LNKFLCGLIS AVLKVMLLIS VASMIGIETT SFIAVVGAAG LAIGLALQGS LANFAGGVLI
LIFKPFRVGD TIEAEGYLGS VAEIQILYTV LNTFDNRRVV IPNGNLSNAT LTNVSVYDKR
RCDMTFGIGY DDDIDKAKKI LQRLFEEDER SLTEPAPRIC VGGLGDNSVD LMFRPWVGTD
DLWPYYWDMQ EKVKKAFDEE GISIPYPQRD VHLYNASND
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