Gene MADE_01976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01976 
Symbol 
ID6775903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2133680 
End bp2134171 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content42% 
IMG OID642755412 
Productpeptidyl-prolyl cis-trans isomerase B 
Protein accessionYP_002126274 
Protein GI196156785 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTACGT TGAAAACAAA TTTCGGTGAT ATCACCCTAG AGCTTTTTGA AGATAAAGCG 
CCTAAAACCG TAGCGAACTT TCTTTCTTAT GTAGAAGACG GCTTCTTTGA CAACACTATT
TTCCATCGTG TAATTAACAA CTTCATGATT CAAGGTGGTG GTTTCACCCC TGATATGGAA
CAAAAAGACA CCAAAGACCC TATTGAAAAC GAAGCTGACA ACGGCGTTGC AAACGAAGTT
GGCACCATAG CGATGGCGCG TACTCAAGAC CCACACTCAG CCACAGCTCA GTTTTTCATT
AACGTGAACA ACAACGACTT CCTAAACCAT ACAAGCAAGT CGATGAATGG TTGGGGCTAC
TGTGCATTCG GTAAAGTAAC TGAAGGCATG GATGTTGTAG AGAAAATTAA AGCGGTTAAA
ACAGGTAATA ACGGCTACCA CCAAGACGTA CCTGTAGAGC CAGTGATCAT TGAAAAAGCA
GTGGTTGCTT AA
 
Protein sequence
MVTLKTNFGD ITLELFEDKA PKTVANFLSY VEDGFFDNTI FHRVINNFMI QGGGFTPDME 
QKDTKDPIEN EADNGVANEV GTIAMARTQD PHSATAQFFI NVNNNDFLNH TSKSMNGWGY
CAFGKVTEGM DVVEKIKAVK TGNNGYHQDV PVEPVIIEKA VVA