Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01953 |
Symbol | |
ID | 6775759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2106388 |
End bp | 2107137 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642755389 |
Product | ISSod6, transposase |
Protein accession | YP_002126251 |
Protein GI | 196156762 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0375505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAACTG ATCAGCGGTG GCAAAAGCTA CTTCAAGTAA TGAAGAGCAC AGGCCGCATT TATAACAAAC CAGAACACAG AATGACCTTT GAAGGGATAC TTTACCGGTT GAGAACCGGT ATCCCGTGGC GAGATTTACC CACAGAGTTT GGAGGCTGGA GTACCATCTA TCGACGCTTC AATTTATGGT CGAAGAAAGG TTTATTAAAT AATTTATTCA ATGAGTTAGC AAAACTGGCT GATTATGACT GGGTCTTTGC TGATGGTTCG ATTGTCAAAG CTCATCAGCA TAGTACAGGT GCTGCGACTT CAGACAATGA GTGCATAGGA AAGAGCCGTG GTGGCAATTC GACAAAAATC CATTTAGCCG TGGATAGTGG GGGGCTTCCC ATTTATTTTG AGCTATCAGA AGGCCAGAGA AATGACATTG CTCGTGCTCA AAGTTTGGTT GACCACTTAC AGGAAGTAAA TATTTTCGTA GGCGACAAAG GCTACGATAG TGATGCATTA AGGGAATATA TTGAAGCCAG AGGCGGTATT TCAGTCATAC CAAAACGTAA TTATGGCCAA GATATAGACA AAGAGAGTGT CGACTGGTGT CTTTATAAAT ATCGACACTT AGTTGAAAAT GCCTTTGCTC GAATAAAGCA TTATCGTTCA GTATCAACTA GATATGAAAA GTTAGCGAGA AACTATGCCA GTATGGTATC ACTGGCATTT TCAATGATGT GGCTGCCGAT GTATTGCTGA
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Protein sequence | MLTDQRWQKL LQVMKSTGRI YNKPEHRMTF EGILYRLRTG IPWRDLPTEF GGWSTIYRRF NLWSKKGLLN NLFNELAKLA DYDWVFADGS IVKAHQHSTG AATSDNECIG KSRGGNSTKI HLAVDSGGLP IYFELSEGQR NDIARAQSLV DHLQEVNIFV GDKGYDSDAL REYIEARGGI SVIPKRNYGQ DIDKESVDWC LYKYRHLVEN AFARIKHYRS VSTRYEKLAR NYASMVSLAF SMMWLPMYC
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