| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01941 |
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| Symbol | |
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| ID | 6775896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2090500 |
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| End bp | 2091207 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642755377 |
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| Product | putative succinyl-CoA transferase, alpha subunit |
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| Protein accession | YP_002126239 |
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| Protein GI | 196156750 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.546528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGGAT TTAATAAGGT CGTTTCGTCG TATGAAGACG CAATGGCGGG TCTGAAAGAC
GGAATGACCG TTATTGCAGG TGGGTTTGGT CTTTGCGGAA TACCTGAGGG GCTAATTGCC
CAAATCAAAA CGCTGGGTGT TTCAAATCTC ACGGTAGTAT CGAACAATTG TGGCGTTGAT
GGCTTCGGTT TGGGTCTTCT GTTAGAAGAT AAACAAATTG CCAAAATGGT ATCGTCTTAC
GTAGGCGAAA ACGCTCTATT TGAAAAGCAA TTACTTGATG GTGAACTAGA AGTAGAGTTA
ACGCCACAGG GCACGCTAGC GGAAAAAATG CGTGCAGGTG GTGCGGGTAT CCCAGCTTTC
TACACGGCCA CAGGCTATGG GACGCCGGTA GGTGAAGGCA AAGAGGTAAA ATCATTCAAT
GGGCGCCCCT ATATTCTTGA AGAAGCCATT ACCGGCGACT TTGCTATCGT AAAAGCATGG
AAAGCGGATA CGTTCGGCAA CTGTGTATAT CGACACACGG CGCAAAACTT CAATCCTATG
GCCGCAACTG CCGGTAAGAT TACCGTGGTG GAAGCTGAAG AGATTGTCGA GCCAGGAACG
CTTAACCCAA GCGAAATTCA TACTCCTGGT ATTTATGTTA ACCGCGTTAT TCAAGGGACT
TTTGAAAAAC GAATTGAGCG CCGTGTAGTT AGTGAGGAGT CAGTATAA
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| Protein sequence | MAGFNKVVSS YEDAMAGLKD GMTVIAGGFG LCGIPEGLIA QIKTLGVSNL TVVSNNCGVD
GFGLGLLLED KQIAKMVSSY VGENALFEKQ LLDGELEVEL TPQGTLAEKM RAGGAGIPAF
YTATGYGTPV GEGKEVKSFN GRPYILEEAI TGDFAIVKAW KADTFGNCVY RHTAQNFNPM
AATAGKITVV EAEEIVEPGT LNPSEIHTPG IYVNRVIQGT FEKRIERRVV SEESV
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