| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01916 |
|---|
| Symbol | |
|---|
| ID | 6775552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2065046 |
|---|
| End bp | 2065483 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642755352 |
|---|
| Product | putative PRS2 protein |
|---|
| Protein accession | YP_002126214 |
|---|
| Protein GI | 196156725 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4539] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0781944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATACG GCGAAAGTCA TCAAAATAGA ACAAATGTCA TCATTCATGC GATAGCGGTA
CCAAGTATCT ATTTTGTTTC ACTGGCGTTA CTGTGGAGTT TGCCAGTACC CGAATTTATT
GCGCAGTTTG ACATCACGTG GGCGCATATT ATTGCTGTTC CTGTGTTGTA TTACTATTTT
ATGTTATCTG GCCCTATTGG GGCCGCAATG ACGTTACTCA CCATTTTATG CTTTGGGGCA
GTTAATGCCT TAGCTCACTT CAACGTTTCT GTGTGGCTGT TTTCGCTTGT GCTTTTTGTC
GTCATGTGGG TACTCCAGTT TATTGGGCAC CACATAGAAG GAAAGAAACC TTCGTTTTTT
GAAGATTTAC GTTTTCTGCT TGTTGGTCCG GCGTGGTGGT GGGTTCACTG GCTAAAACGT
ATGAACATAA GTTACTAG
|
|---|
| Protein sequence | MQYGESHQNR TNVIIHAIAV PSIYFVSLAL LWSLPVPEFI AQFDITWAHI IAVPVLYYYF
MLSGPIGAAM TLLTILCFGA VNALAHFNVS VWLFSLVLFV VMWVLQFIGH HIEGKKPSFF
EDLRFLLVGP AWWWVHWLKR MNISY
|
|---|
| |