Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01894 |
Symbol | |
ID | 6776008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2039218 |
End bp | 2041788 |
Gene Length | 2571 bp |
Protein Length | 856 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642755330 |
Product | hypothetical protein |
Protein accession | YP_002126192 |
Protein GI | 196156703 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03502] extracellular lipase, Pla-1/cef family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.128925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCTTG CGCTGGGTCT AGCAGGCTGT GGTGGCTCCG ATGAAACCCT TTCCGACATT CAGGCCGAAA CAGAAGTCCA AACCCCATTT TCGCGGATCC TTTTTGACCC AGCAGCAGGG AACCTCAACA TTCCAAACGA CCTTCTTATG CTTCCGGGCG ATGACGGTTT CTTCGATTAC ACACTAAATA TCCCAGTGGC TGACCCCACA GACTTTGCTG ACCCGCAAAA TGCGCTTAAC GTGTTAGATG GGTGGTCTAC TCAGCACCCG TTCGTTATCA ACGTTGTAAC ACCGCCGGGT GCTTCGTTAG ACGAAAGCAC GCTAGCATCT GGCGTATTGT TGTATGAAGC AACGCTAGGT CTTGACCAAA GTGACCCAGA TTGCGCGCAA ATCACCACGC CATCCGCGGG CTGTAAACTT GGTGATCAAC TTACTTTCGG TGTTGATTAT GTATTAAGCC TTGCCGATAG CAACACGATT ACTTTTGTTC CTTTAAAACC ACTTAAACCT GCTCAGGGTT ACATGCTGGT TATGACCACT GATTTAAAAG ATTCTTCTGG CAAATCAGTA CAGGGCTCGA CTACGTGGGA CTTGGTAAGG CAAGATATTA ATGCCAACCC TTTATCAAGT GATGCACAGC TTCAATTACA AGGTTTAGTT AATTCTTTAG TTAACCCTCT TCTAGGTGCC GGCTTTGCCC GTGAAGATAT TACTTATGTG TCTGCTTTTA CCACCCAATC TGTTGCTAAT TCGCTAGATA CGATTAAAAA AGTCATGATT AGTGGATTTG CTCAACTTGC AGCAGGCGGC GATCCTTCTG CGCCTTCAGC ACTACCGGCG ATTACAGTTG GTGATGCAGC AGTAGCGCCA AATGCAATGG AAGCACTAGG GCTTGTAAAC TCTACGGTTG TTGCAGGTGC GGTAGAGCAG GGCAAACAGG GGTTGTCTGA GCAAGTACAG GCAGCCATTG ATGCAACTGA CTTTAGCGCG TTGGAAACGT GTGCAGGTCT GGCTGGTACA GTTTCTGGCC AATTGTCTGC GCAGTGGGGC GCACTAAACG ACTTTGCTGT TGGCGTATCT ACGGGTATCT TGGCGCAAGC AGGGCCATTC TGTGCGGCAC AGCGCTACGA GGGTAATATT GCACTGCCTT ATTTCCTAGG TGTTCCGAGT GCTGAAAACC CATTAGCACC AGTAAATGAC TTCTGGAAAG CAGCGTGTGA TAGCGGCATT GTGCTAGCAG GCGCACCGCA AGAATTGCTT GCTAATGCTG AGCCAGGTCC AAATGCAGAA ATGTGTTCTT CTCTTGGCCT TGCTGACGTT CGCATTAATG GTGAAATGCT AGATAGCGCT AGAAACATTA CGAAGTTCAA TCCATATCCA CAGCCTACCG GCGGTAACAT GGGAACGGAG ACGCTAGACG TGCAGGTAAC GATTCCTGAT CCAGCCATTG CTGGTGCACT AGGTTTCCCA ATTAGTATGC CAGAAGCAGG ATGGCCGGTC GTTATTTTAG CGCATGGCAT TACTAGTCAA AAAGAAGATA TGCTTGCCAT TACGGGTACG CTGTCGCTGG CAGGTATTGC GTCTGTAGCC ATTGACCAAC CGCTACACGG TAGCCGTGGC TTTGATTTAG ATGGCGATGG TACTGACGAC CTTAACGCTA CAAGCGTAAG CGCCACGCAC TATATGAACC TAGCAAGCCT GCCTACGGCG CGGGATAACT TGCGCCAAAG TGTGTCTGAT CTTCTTGGCT TACGTTTAGG CTTAAACGCA GTGATTGATA ATACAACAAC ACAAAACGTT AAGTTCGATA TGGGTCGTGT TTCAATCATG GGTGTTTCTT TAGGGGCCAT TACTGGCGGT AATTTTGCTG CGGTTGCAAA TACATCAATG GGCGGTGATT TAGCAGCACT TGATGGTATG TTTGCTGTTA GAGAAGCGTC TCTTGAATCG CCGGGAGGCG GCGTAGCACA ATTCTTACTA GAGTCTGCTG CTTTTGGCCC CCTGATCAAA GGGTTACTGC TTTCACAGGC ATCAGAAGAT TTTGTTGCTC TATTACAGCA GTTGTATGAA ACAACTGACG TAAACGAAGA ACAACTTGCA GCGGCAGTGG CTATCTTTGA AGAGGCGTTA ACAGAAGAAC AGGCTGCTGA AGTAAATGCG GTATTTGCTG AGTTTGCTTT TGCTGCTCAA ACCGTCATGG ATGCGGGTGA CCCAACCAAC TATGCACAAA CGCTTGGTAG TAATACGCCT GTTCACATGA TGACGGTAGT AGGTGATGGC AGCGAAGAGA ACTTGCCTGA CCAAGTAATT CCAGTGTCTA CAGCCTTACC ACTGTCGGGC CAGTTACCGC TAGCTGCTAC TATTGGCCTA GAGCAGGTAA CAACGACTCA AGGGCCAGGT ACTGACCCAA TTAGTGGCTT GGTATTGTTC AATAGTGGGG CTCACGCATC TAGCTTAAGC CCAGCGGCGA GCGCAGCGGT TACTACCGAA ATGCAAAAAG AAGTGGCTGG CTACATAGCT TCAGATGCGT TAGCGTTACC TATCTCTGAT GAAAGTGTGG TTGCAAACTA A
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Protein sequence | MALALGLAGC GGSDETLSDI QAETEVQTPF SRILFDPAAG NLNIPNDLLM LPGDDGFFDY TLNIPVADPT DFADPQNALN VLDGWSTQHP FVINVVTPPG ASLDESTLAS GVLLYEATLG LDQSDPDCAQ ITTPSAGCKL GDQLTFGVDY VLSLADSNTI TFVPLKPLKP AQGYMLVMTT DLKDSSGKSV QGSTTWDLVR QDINANPLSS DAQLQLQGLV NSLVNPLLGA GFAREDITYV SAFTTQSVAN SLDTIKKVMI SGFAQLAAGG DPSAPSALPA ITVGDAAVAP NAMEALGLVN STVVAGAVEQ GKQGLSEQVQ AAIDATDFSA LETCAGLAGT VSGQLSAQWG ALNDFAVGVS TGILAQAGPF CAAQRYEGNI ALPYFLGVPS AENPLAPVND FWKAACDSGI VLAGAPQELL ANAEPGPNAE MCSSLGLADV RINGEMLDSA RNITKFNPYP QPTGGNMGTE TLDVQVTIPD PAIAGALGFP ISMPEAGWPV VILAHGITSQ KEDMLAITGT LSLAGIASVA IDQPLHGSRG FDLDGDGTDD LNATSVSATH YMNLASLPTA RDNLRQSVSD LLGLRLGLNA VIDNTTTQNV KFDMGRVSIM GVSLGAITGG NFAAVANTSM GGDLAALDGM FAVREASLES PGGGVAQFLL ESAAFGPLIK GLLLSQASED FVALLQQLYE TTDVNEEQLA AAVAIFEEAL TEEQAAEVNA VFAEFAFAAQ TVMDAGDPTN YAQTLGSNTP VHMMTVVGDG SEENLPDQVI PVSTALPLSG QLPLAATIGL EQVTTTQGPG TDPISGLVLF NSGAHASSLS PAASAAVTTE MQKEVAGYIA SDALALPISD ESVVAN
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