| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01893 |
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| Symbol | |
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| ID | 6775949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2038094 |
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| End bp | 2038840 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642755329 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_002126191 |
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| Protein GI | 196156702 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000187394 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATT ACAACGCACC AGTAGATTTG TTACGCGACA AAGTGATTCT TGTCACCGGT
GCCGGCGATG GGATTGGTGC ACAAGCCGCG AAAACTTATG CTGCTCATGG CGCTATTTGT
ATTTTATTAG GCCGTACTGT ATCAAAACTT GAAGCCGTCT ATGACGACAT TGTTGAAGCT
GGTGGCCAAG AGCCTGCGAT TGTCCCCTTA GACATTAAAG GTGCTACCCC CTCTCACTAT
CAGCAGATGA CCCAGACGAT TATTGACCAG TTCGGCCGTC TAGATGGGGT GCTACACAAT
GCAAGCATTC TTGGGCATTT AAGCGCATTT AAAGATATCG ACGCCGAAGA GTGGCAAGAC
GTGATGCAAG TTAACGTAAA TGGTATGGTG TACATGACTC AAGCGCTCAT TCCGGCGTTA
GAGAAAGCCG AGAATGCATC AGTGATTTTT ACCACATCGA GTGTAGGCCG AAAAGGCCGT
GCGTTTTGGG GAACCTATGC GGTTTCTAAG TTTGCGACAG AAGGCGTTAT GCAAACCCTC
GCCGATGAGT ACCAGAACAA AACACTAAGG TTTAATTGTA TCAACCCTGG TGGTACTCGC
ACGCAAATGC GCGCTCAAGC GTTTCCGGCA GAAAATCCAG ATACATTAAA AACGCCTGAA
GATATTATGC CTATGTATCT TTACTTAATG GGGAATGACA GCATCGAAGT TAACGGGCAG
TCACTCGATT GTCAGCCAAA AAAATAG
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| Protein sequence | MNDYNAPVDL LRDKVILVTG AGDGIGAQAA KTYAAHGAIC ILLGRTVSKL EAVYDDIVEA
GGQEPAIVPL DIKGATPSHY QQMTQTIIDQ FGRLDGVLHN ASILGHLSAF KDIDAEEWQD
VMQVNVNGMV YMTQALIPAL EKAENASVIF TTSSVGRKGR AFWGTYAVSK FATEGVMQTL
ADEYQNKTLR FNCINPGGTR TQMRAQAFPA ENPDTLKTPE DIMPMYLYLM GNDSIEVNGQ
SLDCQPKK
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