Gene MADE_01887 details

Gene Information

• Locus tag: MADE_01887
• ID: 6775752
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 2027565
• End bp: 2029457
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 642755323
• Product: putative glycosidase
• Protein accession: YP_002126185
• Protein GI: 196156696
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0366] Glycosidases

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTCCA TTGGACTGGC TGCGTGCTCA GGTCCATCAC CCTCTCAAAA GTCAGTAGCT 
GGAGAAGCGA CCTCGACAAC TGCTAACTCA ACGCAAAATG CAGAGATGAT TGCACCTAAT 
ACTTCTGACA AAACACAGGG AAAACCGGTT GTATACCAGG TTTTTACTCG CTTATTTGGC 
AATACTAATA ACGCTAACCA CCCCTGGGGT TCGATAGAAC AAAACGGAGT TGGAAAGTTT 
AGTGATTTTA CGCCCCAAGC GCTGGCAGCG ATAAAAGCCC TAGGTACTAG CCATGTTTGG 
TATACAGGTA TTCCGCACCA CGCCGTTATT AACGACTATA CCGCGTTTGG TATTTCAAAT 
GATGACCCAG ATGTGGTTAA AGGCCGCGCA GGTTCACCTT ATGCGGTTAA AGATTACTAC 
AATGTTAACC CCGACCTTGC CGATGATCCG GCCAAGCGTT TAGAGGAGTT TGAAGCTCTC 
ATTGCCCGAA CGCATGATGC GGGAATGAAA GTTATCATCG ATATTGTGCC TAATCACGTG 
GCCCGCGACT ATGAATCACT GTCAGCCCCA GAGGGAGTCA GCGACTTTGG TGCCCATGAT 
GATACCTCTG TGGAATATGC CCGCGACAAC AATTTTTATT ATGTTGTTGG CGAAGCGTTT 
GAAGTTCCTG ATGGCGGCGA CTATAAGCCC CTTGGTGGTG ACAGTCATCC CTTATCCGAT 
GGCAAGTTTG ATGAGTTTCC AGCTAAGTGG ACGGGTAATG GGGCACGTGC CGCTCAGCCC 
GATATTAATG ACTGGTATGA AACCGTTAAG GTTAATTATG GCGTAAGGCC CGACGGTACA 
TATGATTTCC CAACCCTACC TGAAGGTTTT AGCGAAAAGT CTTTTGCGGA ACATGCGGCG 
TTCTGGGAAG GAAAAGACGT ACCGGATTCC TGGTACAAGT TTAGAAATAT AGCGCATTAT 
TGGCTCGATA AAGGGGTAGA CGGGTTTCGC TATGATATGG CCGAAATGGT ACCCGTTGAA 
TTTTGGTCAT TTTTAAACAG CAGCATAAAA CAAAAGGCGC CAGACGCCTT CCTGTTGGCT 
GAAGTTTACC AACCAGATAA ATACCGTGCT TATATCCAGC AAGGTAAAAT GGATTATTTG 
TACGACAAAG TAGGTTTCTA CGATACGTTG AAAAAGATTA TGCAGGGCAG TGGTGCAGTA 
AGTGATTTGG TCGCTATCCA TGAAGAAATT CGCGATATTG CGCCACATAT GCTGCATTTT 
TTAGAAAATC ACGATGAACA GCGCATAGCC AGCCCAGATT TTGCCGGCGA CGCTGACAAA 
GGAAAACCTG CCTTAGCCGT AAGTGCACTA ATTAGTATCG CTCCTACCTT GCTTTACTTT 
GGACAAGATG TTGGTGAAGA CGGTAGCGAA GAGACTGGGT TTGGCGATCC AACACGAACC 
ACTATTTTTG ACTATGCAGG CGTACCGGCT CATCAACGTT TTATGAACAA CGGCAAATTT 
GATGCAGGGC AGTCAACAGA GAAAGAAAAA GCGTTGCATC GCTTTTATAA AGACGTCATG 
AACATCGCTA CAAGCAATAG CGCAATTACT GGGCGTTATC AAAGCCTGCA TGCCCTGAAC 
CTAGGCGTTG AAGGATCTGC GTATTCTGAG CAGCAGTTTG CGTTCATAAG AGAGAAAAAC 
GACCAAGGTT TTATTGTTAT TGCTAACTTT AGCGATAACG CTACAGGCCC TATTTCACTG 
ACAGTACCGG CTTCTGCGAT AGAAACCGCG GGCAACAAGC TTGAGCTTAA ACCTTTACTT 
TCTCATGACG GTTTAACGCT TGAGCAGGGC GAGGTGAACT ATCGCGCTAC AACAACGTTA 
GACGCGTTGG AAACCAAGGT GTTTGCTTTT TAA 

 

Protein sequence

MLSIGLAACS GPSPSQKSVA GEATSTTANS TQNAEMIAPN TSDKTQGKPV VYQVFTRLFG 
NTNNANHPWG SIEQNGVGKF SDFTPQALAA IKALGTSHVW YTGIPHHAVI NDYTAFGISN 
DDPDVVKGRA GSPYAVKDYY NVNPDLADDP AKRLEEFEAL IARTHDAGMK VIIDIVPNHV 
ARDYESLSAP EGVSDFGAHD DTSVEYARDN NFYYVVGEAF EVPDGGDYKP LGGDSHPLSD 
GKFDEFPAKW TGNGARAAQP DINDWYETVK VNYGVRPDGT YDFPTLPEGF SEKSFAEHAA 
FWEGKDVPDS WYKFRNIAHY WLDKGVDGFR YDMAEMVPVE FWSFLNSSIK QKAPDAFLLA 
EVYQPDKYRA YIQQGKMDYL YDKVGFYDTL KKIMQGSGAV SDLVAIHEEI RDIAPHMLHF 
LENHDEQRIA SPDFAGDADK GKPALAVSAL ISIAPTLLYF GQDVGEDGSE ETGFGDPTRT 
TIFDYAGVPA HQRFMNNGKF DAGQSTEKEK ALHRFYKDVM NIATSNSAIT GRYQSLHALN 
LGVEGSAYSE QQFAFIREKN DQGFIVIANF SDNATGPISL TVPASAIETA GNKLELKPLL 
SHDGLTLEQG EVNYRATTTL DALETKVFAF