| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01879 |
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| Symbol | |
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| ID | 6775722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2011941 |
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| End bp | 2014757 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755315 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002126177 |
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| Protein GI | 196156688 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAT TTAAACCCAA CCTAATTAAA GCTGCGCTTA TTTCAGGCGG TATGGCGTTT
GGCAGTGCAC CAGCATTTGC ACAAGATGCA AACACTGATG CTGTTGATGA AGCAAATCTT
GAAGTAATTC AAGTGAGCGG TATTCGCGGC AGCTTACAGC GTGCTCAAGC AATCAAAATG
GATAACACCT CAATTGTTGA AGCGTTATCA GCAGAAGATA TTGGTAAGCT ACCAGATACC
AGTATTGCAG AATCAATCGC ACGTCTTCCT GGTGTAACTG GTGAACGTCG TAACGGTCGT
ACAAGTGGTA TCTCTGTTCG TGGTTTTAAC GAGAACTACG TTGGTACGTC ACTAAACGGT
CGTGAACTTC TAGGTATGGG TGATAACCGT GGGGTTGAGT TTGACCTTTA TCCAACGGAA
ATCATTTCAA ACATTCTGGT ATACAAAACA CCAGAAGCGG GCATGACTAC CCAAAATATC
GGTGGTTCAA TTGACCTTCA AACGGTTAAG CCTCTAACGG CAGAAAGCAC GTTTACCGTA
AACGGCACGT TCGAAAAGAA TGCTGAAGAC TCTCCAAACC CAGATTTTGA CAACGACGGT
CACCGCATTT CTGTAAACTT TGTCGATCAA TTTGCCAACG ATACGATTGG TTTAGCGTTA
ACTGTTGCGA GCATGGAGTC TCCGCGTCAG GAGCAACACT TCCGCGGTTG GGGTTATGCG
GGTGTGAACT TTGATAATGA GCGCCGTGAC CTAGACCCTG TAGAAGTTCC TGAAGGTACA
GTAGTTCTTG GTGGTCACGA TTCATTCCAG CGTTCAGCAA TGCTAGAACG AGACTCAATT
GCCGCTGTTG TTGAATGGGC GCCTACCGAC AAGCTCAATA TCCAACTTGA CGCGCTTTAT
ATCGATTTCG TTGAAGACGA TGTACGCCGT GGTCTTGAAG AAGGCGGTGC AGAGTGGGGT
ACAAGCGCTT ACACTATCAC TGGTGTTGAA AACGGTCTGG TAACCAGCGG TTACTCTGAT
GGTTTCTATA GCGTTGTACG TAACGATGCG CGTCGTCAAG AAGCAGACCT AACCACAGTA
GGCATTAATG CTGAATACCA AATCAACGAC TCTTGGACAC TAGAGCTTGA TTACTCTACC
GGTAAAGTTG AAAAAGAAAT TGTCGATGTA GAAAGCTACT CAGGTGTAGG TCGTGCTGGT
ACTGAAGGCC GTCCAATTAC TGCACGTAGC TGGGAAATGA CATCTTCTGG TGTAATGTTC
TCTGACCACC CAACTATTGC ACCGGTTGAC CTTACCGACC CAACACTTAT TAGCCTTGCA
GGTCCGCAAG CATGGGGCGC ACGTCCGTTA CTTGAGTCTG ATGCACAGGA TGGTTTCGTA
AACCAGCCGC TTTTCGAAGA AGAGCTTGAT ACCCTTCGTT TCGACGTTAA AGGCTATGTA
GATTGGGGTG TGGTAACTGG CCTATCTGCT GGTGTTGTAT ATTCTGACCG CTCTAAATCT
AAAGACAATA ACGGTGCTTA CCTAACAGCG CCTTCATATC CTGGAAATGC TGCTATTCCT
GAAGTGCTAG GCGTAACGAA CCTTAACTTT ATTGGAATTG ACGGCGTGTT AGCGTACGAC
TCGCTAGGTC TTTTCGAAAG TGGTTATTAC ATTGAAAGCG ATGCAAGCCG CGTTCAAAAC
GATCGCTTAG GTGATACTTA CACCGTTGAT GAAGAGCTAC TTACCCTTTA CACCAAACTA
GATTTGGAAA TGGAAGTTGG CGATATTTGG GTTCGCGGTA ACGTAGGCCT TCAAGTAGTA
AGTGCAGATC AAGAATCGAC AGGTTTCTCT GCAACGTCTG ATCGCGATGG TTACACCATT
GCTAGCCCTG TAACAGGTGG CGCAGACTAC ACAGATGTTC TTCCCACACT TAACCTTTCA
GCAGAAGTGG CTGAGGGCCA GTTTGTGCGC TTGGGCTTGA GCAAAGTTAT TTCTCGTCCG
CGTATGGATG ACATGCGTCC AAATACTCAG GTTACGTTCT CGTTCAACGA TAACCAAATC
ACTAGCCCTG ACATTGAAAA TGGTCCATGG GGTGGTAGTG CTGGTAACCC TGAATTGCGT
CCGCTTGAAG CTAACCAGTT TGACCTAGCT TATGAGAACT ACTTTGCAGA TACAGGTTAT
GTAGCTGTGT CGTTCTTCTA TAAAGACATT AAAAACTGGC ACCGCAGCAC GTCAATTGTG
GCTGATTTCA CAGAGTTTTA TATTCCTGAG CTACATCAGG GCTCTGAAGG TCAAACTCCT
GTATTGTTCA CAGGTCAAGT AAGCAGTGTA CTAGATGGGT TCGAAGGCTT TGTTCGCGGT
TACGAATTAC AAGGTTCACT TCCATTTGAT ATGATCCATG ATTCACTTGA AGGCTTCGGT
TTGTTCGCAA GTGCAACCTT TATGGATGGT GAAGTTGACG CGGCTCCGGG TCAAACTGAA
ACACGTATTC CTGGACTATC TGAAGAGTCT TACAGTATGA CTTTCTTCTA TGAGAATGCT
GGTTTCGAAT TCCGTCTTGC GGCAACAAAA CGCGATCAGT ACCTAACTGA AGAAAGAGGT
ACAAGTCTTG CGTTAGTTGA TGCAACGAAG CAAGGCGGTA CGCTTGTTGA TGCGCAAATT
GGCTATGACT TTAGCGAGTC TGGTATCGAA TATCTAGAAG GCCTACGTGT TACTTTACAA
GCACAGAACC TGACCGATGA AGATGATATT CAAGCGTCAG CGGCTGACGG CCGTCAAATC
ACGCAGTTCC AAACTTATGG AACGAACTAC TTGCTAGGAT TTAACTACAA GTTCTAA
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| Protein sequence | MKQFKPNLIK AALISGGMAF GSAPAFAQDA NTDAVDEANL EVIQVSGIRG SLQRAQAIKM
DNTSIVEALS AEDIGKLPDT SIAESIARLP GVTGERRNGR TSGISVRGFN ENYVGTSLNG
RELLGMGDNR GVEFDLYPTE IISNILVYKT PEAGMTTQNI GGSIDLQTVK PLTAESTFTV
NGTFEKNAED SPNPDFDNDG HRISVNFVDQ FANDTIGLAL TVASMESPRQ EQHFRGWGYA
GVNFDNERRD LDPVEVPEGT VVLGGHDSFQ RSAMLERDSI AAVVEWAPTD KLNIQLDALY
IDFVEDDVRR GLEEGGAEWG TSAYTITGVE NGLVTSGYSD GFYSVVRNDA RRQEADLTTV
GINAEYQIND SWTLELDYST GKVEKEIVDV ESYSGVGRAG TEGRPITARS WEMTSSGVMF
SDHPTIAPVD LTDPTLISLA GPQAWGARPL LESDAQDGFV NQPLFEEELD TLRFDVKGYV
DWGVVTGLSA GVVYSDRSKS KDNNGAYLTA PSYPGNAAIP EVLGVTNLNF IGIDGVLAYD
SLGLFESGYY IESDASRVQN DRLGDTYTVD EELLTLYTKL DLEMEVGDIW VRGNVGLQVV
SADQESTGFS ATSDRDGYTI ASPVTGGADY TDVLPTLNLS AEVAEGQFVR LGLSKVISRP
RMDDMRPNTQ VTFSFNDNQI TSPDIENGPW GGSAGNPELR PLEANQFDLA YENYFADTGY
VAVSFFYKDI KNWHRSTSIV ADFTEFYIPE LHQGSEGQTP VLFTGQVSSV LDGFEGFVRG
YELQGSLPFD MIHDSLEGFG LFASATFMDG EVDAAPGQTE TRIPGLSEES YSMTFFYENA
GFEFRLAATK RDQYLTEERG TSLALVDATK QGGTLVDAQI GYDFSESGIE YLEGLRVTLQ
AQNLTDEDDI QASAADGRQI TQFQTYGTNY LLGFNYKF
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