| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01871 |
|---|
| Symbol | |
|---|
| ID | 6775983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2001788 |
|---|
| End bp | 2002066 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642755307 |
|---|
| Product | putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD |
|---|
| Protein accession | YP_002126169 |
|---|
| Protein GI | 196156680 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0568565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTTCG CGCTTCTTTT CGTTATTTGG GCTTGGGCAG TTTCTGTTCA CTCGGCTGAA
GGTTTCGCGA ACGTACAAGC AATCATGAAC GGTTTCCTTG GAAAATTTGT CGCAATTGGC
ACAGCCTCAG CGCTGACGTA TCACATTCTA GGCGGCCTAA GACACGTTGT TATGGATTTA
GGTCACTGGG AAGAACTAGA GTCGGGCAAT ACAAGTGCTA AAGCAGTTAT CGCACTTTGG
GTTGTACTGA CCGTAGTATT GGGAGTTGCA TTATGGTAA
|
|---|
| Protein sequence | MFFALLFVIW AWAVSVHSAE GFANVQAIMN GFLGKFVAIG TASALTYHIL GGLRHVVMDL
GHWEELESGN TSAKAVIALW VVLTVVLGVA LW
|
|---|
| |