| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01860 |
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| Symbol | |
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| ID | 6775417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1990559 |
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| End bp | 1991218 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642755296 |
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| Product | Short chain dehydrogenase family protein |
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| Protein accession | YP_002126158 |
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| Protein GI | 196156669 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.203928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGTAG TTATTACGGG CGGTAATCGC GGCATAGGGC TTGCGCTTAC CAAGCAATTT
AAAGCACGTG GCGCAAAAGT CTATGCTACG TGTCGCAATA GTTGTGATGA GTTGAACTCT
GCAGGCGTTA CTATTATCAA AGGCGTCGAT GTCTCTCAAC CTGAAATGCT GGCAGAAAAA
CTCGCACCCC TAATGGATGT GAAAATTGAT TTGCTCATTA ATAACGCTGG GGTTCTGGGC
AAAGAAAGCC TAGATGACTG GGACCCAAAC ACCATAGATT ATCAGTTCCG TGTTAATGCC
ATGGGGCCGC TTCTTGTTTC CCAGACTCTC TTACCGGTGA TGGCAGACAA CAGTAAAATT
GCGATGATCA CAAGTCGTAT GGGATCGATG GCTGATAATG GCTCTGGTGG TTATTATGGC
TATCGCATGT CTAAAGCTGC GTTGAATGCA GCCTCCGTAT CTTTGGCAAA CGATCTAAAG
CCAAGAGGGA TTGCTGTAGG TATTTTTCAC CCTGGGTTCG TGCAAACTGA AATGGTTAAT
GGTGCAGGCG ATATTGATGC TGATACGTGT GCCGAACGTT TGTCGCAGCG TATTGATGAG
CTTAACGTGG ATAATGCAGG GCGCTTTATC CATTCAAATG GTGACGAGCT ACCTTGGTAG
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| Protein sequence | MNVVITGGNR GIGLALTKQF KARGAKVYAT CRNSCDELNS AGVTIIKGVD VSQPEMLAEK
LAPLMDVKID LLINNAGVLG KESLDDWDPN TIDYQFRVNA MGPLLVSQTL LPVMADNSKI
AMITSRMGSM ADNGSGGYYG YRMSKAALNA ASVSLANDLK PRGIAVGIFH PGFVQTEMVN
GAGDIDADTC AERLSQRIDE LNVDNAGRFI HSNGDELPW
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