Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01851 |
Symbol | |
ID | 6776118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1981484 |
End bp | 1983037 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642755287 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_002126149 |
Protein GI | 196156660 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.197167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCGCG GAGACGCTCA CCCCGATCGC GTAGAAGTTC GCGGTGAAGT ATTCATGCCT CGCGAGGGCT TTGCCAAGTT AAACGAACAT CAGAAAAACG CCGGTGGTAA GGTGTTTGCC AATCCACGGA ATGCCGCAGC GGGAAGTTTA CGTCAGCTTG ATTCAAAAAT AACCGCTAAA CGCCCGTTGA TGTTTTATGC ATACTCGCTA GGCGTAGTAC AACCTGATAA CTTTACGCTA CCTACCACCC ATAGCGAACG TCTCTCACAA TTAGGTAAAT GGGGGCTGCC CTTGTGCCCC GATATTGATA CAGCTGAAGG TGGGCGAGGC TGTCTCGATT ACTATCATCA TATATTAGAA AAGCGTGACA ACTTACCTTA CGACATAGAC GGCGTTGTCT TTAAAGTAAA CCGTATTGAT TTACAGGCTG CGCTAGGGTT TGTAGCACGT GCGCCAAGGT GGGCAATTGC ACAAAAGTTT CCTGCCCAAG AAGAAGTGAC TAAACTGCTT GATGTAGAGT TTCAGGTTGG CCGTACCGGT GCAATTACCC CTGTCGCAAG GCTTGAGCCC GTTTTTGTAG GCGGTGTAAC TGTGTCAAAT GCGACCTTGC ACAACCAAGA TGAGATTACT CGTTTAGGCG TTAAAGTGGG TGACACTGTG GTTATCCGCC GTGCAGGTGA TGTTATTCCG CAGGTGGTAT CTGTGGTTGA TACAAAACGT ACAGGCAGCG AAACCGACAT AGCTTTTCCC AGTCAGTGCC CTGTGTGCGG CTCACAAGTA GAAAAGCTTG AAGATGAGGC GGTTGCCCGT TGTACGGGTG GGTTAATCTG TGCAGCGCAG CGCAAACAAG CGCTTAAACA TTTTGCTTCT CGAAAGGCAT TTGATATTGA CGGTTTAGGG GACAAATTGG TCGATCAGCT AGTTGATGCC GATTTAGTTC ATAGCCCTGC TGACTTCTTT ACTCTATCAC TTGGTGATGT AGTTGGTTTA GAACGCATGG CTGAAAAATC AGCGAGTAAG TTGTTATCCT CTCTAGAGGC ATCTAAACAA ACTACCTTAG CGAAGTTTCT ATACGCACTT GGTATTCGAG AAGTAGGGGA AGCGACAGCA GCTAATTTAG CGGCGCACTT TGAAACCCTC GATGCAATTC GCGACGCGTC GATAGAGGCG CTGGTTGAAG TACAGGATGT GGGCGAGATA GTAGCAACAC ATATATTTAA CTTCTTTAAT GAGTCACACA ATACTGATGT GATTGATGCG TTGTTAAAAG AAGGCATTAA CTGGCCTGCG ATTGAAAAAC CTGACGCGGA TAACTTACCG CTTGAGGGTA AAACCTGTGT GATCACCGGA ACGCTTAGCG AAATGGGCCG CTCGGATGCT AAAGCGCGCT TACAACTCTT AGGGGCTAAA GTGGCGGGTT CGGTAAGTAA AAATACCGAT TTTCTGGTTG CTGGAGAAAA GGCAGGCTCT AAATTGACGA AGGCCCAAGA GTTAGACGTT GAGGTGTGGG ATGAAGCCAA ACTTATTGCT TTTCTCGCAG AAAATGAGAA ATAA
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Protein sequence | MLRGDAHPDR VEVRGEVFMP REGFAKLNEH QKNAGGKVFA NPRNAAAGSL RQLDSKITAK RPLMFYAYSL GVVQPDNFTL PTTHSERLSQ LGKWGLPLCP DIDTAEGGRG CLDYYHHILE KRDNLPYDID GVVFKVNRID LQAALGFVAR APRWAIAQKF PAQEEVTKLL DVEFQVGRTG AITPVARLEP VFVGGVTVSN ATLHNQDEIT RLGVKVGDTV VIRRAGDVIP QVVSVVDTKR TGSETDIAFP SQCPVCGSQV EKLEDEAVAR CTGGLICAAQ RKQALKHFAS RKAFDIDGLG DKLVDQLVDA DLVHSPADFF TLSLGDVVGL ERMAEKSASK LLSSLEASKQ TTLAKFLYAL GIREVGEATA ANLAAHFETL DAIRDASIEA LVEVQDVGEI VATHIFNFFN ESHNTDVIDA LLKEGINWPA IEKPDADNLP LEGKTCVITG TLSEMGRSDA KARLQLLGAK VAGSVSKNTD FLVAGEKAGS KLTKAQELDV EVWDEAKLIA FLAENEK
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