| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01813 |
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| Symbol | |
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| ID | 6775421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1947703 |
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| End bp | 1949673 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642755249 |
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| Product | Choline-glycine betaine transporter |
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| Protein accession | YP_002126111 |
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| Protein GI | 196156622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000594064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGA CAGAAAATAA ATCTCCACTC AACAAGCCGG TGTTTTTAAC ATCGTCTGCC
TTAATAATCT GTTTACTGAT TTTCGCTGCT GGTACGCCTG AACTAGCAGA CAGTATCTTC
CAAAAATTGC AGGATGTAAT CGTATCTAAC GGTAGTTGGT TTTACGTATT AACGGTTACG
ATTATTGTTC TCGCAGTAGT GTATTTAGGG ATGTCTCGCT ACGGGGAAAT TAAACTGGGC
CCTGACCACG CTACGCCAGA ATTTAGCTTT GGCACTTGGC TTAGTATGCT GTTTGCTGCA
GGTATGGGTA TCGGACTCAT GTTCTTTGGT GTAGCTGAAC CATTAATGCA CTTTATGGCC
CCGCCCACTG CACAGGCAGA AAGTATAGAC GCCGTACGAG AAGCCATGAA AACCACCTTT
TTCCATTGGG GTATTCACGC TTGGGCTATT TATGCAGTGG TAGCGCTTAT ACTCGGCTAC
TTTGCCTACC GACAGAACTT ACCTCTAACG CTTCGTTCTG CGCTGTACCC ACTTATCGGC
GACCGGATTT ACGGTTGGCC AGGCCATGTG GTTGATATAT TTGCCGTTAC TTCGACGGTA
TTTGGTATTT CAACGTCTCT TGGTTTTGGC GCATCGCAAG TTAATGCTGG CTTTAACTAT
TTGTTTGGTT TGCCTTCTAA TACAGGCGTT CAAATTGCCA TTATGGCCGG TGTGGTTGGC
TTAGCAGTAA TTTCAGTTAC CACTGGACTG GACAAAGGTA TTCGTCGCCT TTCAGAAACC
AACATGGTGC TGGCTATTAT CCTACTGTTA ATCGTGTTGT TTTTAGGTCC AACGGTATTT
TTGCTACAGG CCTTTATGCA AAATACTGGC GCATACCTGT CTGACATTGT GAGAAACACT
TTTAACTTAT ACACCTATGA GAAAACTGAC TGGATTGGTG GCTGGACCAT CTTTTACTGG
GGCTGGTGGT TAGCATGGGC GCCTTTCGTA GGCCTGTTTA TAGCGCGTAT TTCATTCGGC
CGTACTATTC GCGAATTCGT TATCGGTGTA CTACTTATCC CTTCAGCGTT TACCCTATTT
TGGATGACCA TATTCGGTAA CGGTGCTATC GACCAAGTTT TGGTACAAGG AAAAGATGTA
CTTGCTCAAA TGGTTAACGA CGATACCTCC GTCGCACTAT TTGTATTTTT AGAACAGTTT
CCTTTTTCTT CAGTACTGAG CTTTATCGCC GTACTTATGG TGATTATATT CTTTGTAACC
TCGTGTGATT CAGGCGCAAT GGTAGTCGAC ATGCTGTGTT CACACGGTGA AAACAACACC
CCACTATGGC AACGTGTTTA CTGGGCAGTT GGTGTAGGTA TTGTGAGTTC TATACTTCTA
TATGCTGGCG GATTAGGTGC ACTTCAAACC ATGACTATTG CCGCTGCACT GCCATTTGCT
ATTGTCTTGC TTATTGCCAT ATCCGGGCTA TTGAAAGCAC TGCGTATAGA ATCTTATAAG
CGAGAAAGCT TAATGGTGCT GGCAGGCTCG CCACAGCATA GTGACTCTGA CAAAAACTGG
AAAGAACGAT TAGAAAACAT TGTTACCTTC CCAGATGAGA AAGCGGTAAG ACGCTACATC
AACAAGGTGG TTAAACCTGC CATGACTGAA GTTGGTGAAG AGTTTAAAGA ACAGCAATTC
GATGTAAGAA TTGAGGATAC CGAGGAAGCT CTTACCTTAA CAGTGGAATT AGGAGGAGAC
CCGGAATTCG TTTATGCGGT GTATCCAACG TCGACAGAAC AGCCTGAATT TGGTCCAACT
GACACACCAA GACTGGACGA AAACGAAAAG GCCACGTACT ATCGCGCCGA AGTACACCTA
AGTGAAGGTG GTCAAAACTA TGACATTATG GGCTGGTCGA AAATTTCGGT TATTAATGAC
GTGATCGATC ACTATCATAA ACACCAACAT TTTATTCATT TGCTTAAGTA A
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| Protein sequence | MTETENKSPL NKPVFLTSSA LIICLLIFAA GTPELADSIF QKLQDVIVSN GSWFYVLTVT
IIVLAVVYLG MSRYGEIKLG PDHATPEFSF GTWLSMLFAA GMGIGLMFFG VAEPLMHFMA
PPTAQAESID AVREAMKTTF FHWGIHAWAI YAVVALILGY FAYRQNLPLT LRSALYPLIG
DRIYGWPGHV VDIFAVTSTV FGISTSLGFG ASQVNAGFNY LFGLPSNTGV QIAIMAGVVG
LAVISVTTGL DKGIRRLSET NMVLAIILLL IVLFLGPTVF LLQAFMQNTG AYLSDIVRNT
FNLYTYEKTD WIGGWTIFYW GWWLAWAPFV GLFIARISFG RTIREFVIGV LLIPSAFTLF
WMTIFGNGAI DQVLVQGKDV LAQMVNDDTS VALFVFLEQF PFSSVLSFIA VLMVIIFFVT
SCDSGAMVVD MLCSHGENNT PLWQRVYWAV GVGIVSSILL YAGGLGALQT MTIAAALPFA
IVLLIAISGL LKALRIESYK RESLMVLAGS PQHSDSDKNW KERLENIVTF PDEKAVRRYI
NKVVKPAMTE VGEEFKEQQF DVRIEDTEEA LTLTVELGGD PEFVYAVYPT STEQPEFGPT
DTPRLDENEK ATYYRAEVHL SEGGQNYDIM GWSKISVIND VIDHYHKHQH FIHLLK
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