Gene MADE_01796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01796 
Symbol 
ID6775347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1933730 
End bp1934305 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content46% 
IMG OID642755232 
ProductExopolysaccharide synthesis, ExoD 
Protein accessionYP_002126094 
Protein GI196156605 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0457786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATT CAATCGTTGA ATTATTAGAT GAGATGTATG ATGAACAAAG CGAAAAGACG 
TCATTAGGCA AAGTAGTGGA GCGCTTTGAA GATAGAGGCT TTGGCCCACT CCTCTTAATG
CCTGCTCTTA TTGCTTTGCT TCCCACAGGG GCTATACCGG GCGTACCAAC CCTGTGCGGC
TTAACGTTAT TTTTTATCTG TATACAAGTG GCTGTTGGGC GAAAAAGCCC ATGGCTCCCC
AAAGTACTAA AAGAGAAAGA AGTAAGCTCT GATAAGCTAG AAAGCGCAAT TGATAAAGCA
AAACCCTACG CCCAAAAGAC CGAAAAGCTA CTTAAGCCCC GCATGACTTT TCTCTCTCAC
ACCCCCGCTA AAAATATCAT TGCGGGATAC TGTGCTATTG CAGCCCTTGG TATGATCCCC
CTTGAAGCAC TTCCTTTCGC TGTCGCTTTG CCCGCTTTTG CACTTTGCAT AACAGCGCTA
GGCATGGCGA ACCGTGACGG CGTGTTTCTG TCCCTTGGCA TTTTACTCCA GCTAGGTACA
GGTTATCTGG TATTTAAAGC TATTGGCATG ATGTAG
 
Protein sequence
MSDSIVELLD EMYDEQSEKT SLGKVVERFE DRGFGPLLLM PALIALLPTG AIPGVPTLCG 
LTLFFICIQV AVGRKSPWLP KVLKEKEVSS DKLESAIDKA KPYAQKTEKL LKPRMTFLSH
TPAKNIIAGY CAIAALGMIP LEALPFAVAL PAFALCITAL GMANRDGVFL SLGILLQLGT
GYLVFKAIGM M