Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01796 |
Symbol | |
ID | 6775347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1933730 |
End bp | 1934305 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642755232 |
Product | Exopolysaccharide synthesis, ExoD |
Protein accession | YP_002126094 |
Protein GI | 196156605 |
COG category | [R] General function prediction only |
COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0457786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATT CAATCGTTGA ATTATTAGAT GAGATGTATG ATGAACAAAG CGAAAAGACG TCATTAGGCA AAGTAGTGGA GCGCTTTGAA GATAGAGGCT TTGGCCCACT CCTCTTAATG CCTGCTCTTA TTGCTTTGCT TCCCACAGGG GCTATACCGG GCGTACCAAC CCTGTGCGGC TTAACGTTAT TTTTTATCTG TATACAAGTG GCTGTTGGGC GAAAAAGCCC ATGGCTCCCC AAAGTACTAA AAGAGAAAGA AGTAAGCTCT GATAAGCTAG AAAGCGCAAT TGATAAAGCA AAACCCTACG CCCAAAAGAC CGAAAAGCTA CTTAAGCCCC GCATGACTTT TCTCTCTCAC ACCCCCGCTA AAAATATCAT TGCGGGATAC TGTGCTATTG CAGCCCTTGG TATGATCCCC CTTGAAGCAC TTCCTTTCGC TGTCGCTTTG CCCGCTTTTG CACTTTGCAT AACAGCGCTA GGCATGGCGA ACCGTGACGG CGTGTTTCTG TCCCTTGGCA TTTTACTCCA GCTAGGTACA GGTTATCTGG TATTTAAAGC TATTGGCATG ATGTAG
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Protein sequence | MSDSIVELLD EMYDEQSEKT SLGKVVERFE DRGFGPLLLM PALIALLPTG AIPGVPTLCG LTLFFICIQV AVGRKSPWLP KVLKEKEVSS DKLESAIDKA KPYAQKTEKL LKPRMTFLSH TPAKNIIAGY CAIAALGMIP LEALPFAVAL PAFALCITAL GMANRDGVFL SLGILLQLGT GYLVFKAIGM M
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