Gene MADE_01791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01791 
Symbol 
ID6775486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp1931090 
End bp1931728 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content48% 
IMG OID642755227 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_002126089 
Protein GI196156600 
COG category[R] General function prediction only 
COG ID[COG4136] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0263167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTTA GTTTAGAAAA ACTGGTTATC TCTCGTGCAG ACAATGTGCT GTTGAACGTA 
AACGCATGCG TAGAAAAAGG GCAAGTTTTA ACAGTGATGG GGCCAAGTGG AGCGGGCAAG 
TCTACCTTGC TGCAAGCCAT TGCCGGGCAA CTTTATGAGC CATTTAGTGT TAGCGGCATT 
ATTAAAATCG ACAATAACGT GATTAACCGT AAACCCGCCC ATTTGCGTAA AGTGGGCATG 
ATGTTTCAAG ACGCCTTGTT GTTTGAACAT ATGACGGTAG CTGAAAACAT AGCGTTTGCC 
ATGCCAAAAA CTAGCCACAG TAATCCGCAC GCTAGGATGG AGGCCATTAA CACCATGTTG 
AGCGCTGTCG AATTAGAGAG CATGGGGCAG CGTGGTGTAA ATACGCTTTC AGGCGGGCAG 
CAGTCAAGAG TGTCGTTATT AAGAACGCTA GCTTCGGCGC CGGATGTGGT TTTGCTAGAC 
GAGCCCTTTA GTAAGCTTGA CCTTGCGCTT CGTGGGCAAA TTCGAAGCTG GACATTCGAG 
CAGCTTAAAG CGCACAATAT TCCCGCCGTG CTGGTTACCC ACGACAAAGA AGACGCCATT 
GCTGCTGGCG GCCAAATAAT TGAGTTATCG CCATGTTAG
 
Protein sequence
MALSLEKLVI SRADNVLLNV NACVEKGQVL TVMGPSGAGK STLLQAIAGQ LYEPFSVSGI 
IKIDNNVINR KPAHLRKVGM MFQDALLFEH MTVAENIAFA MPKTSHSNPH ARMEAINTML 
SAVELESMGQ RGVNTLSGGQ QSRVSLLRTL ASAPDVVLLD EPFSKLDLAL RGQIRSWTFE 
QLKAHNIPAV LVTHDKEDAI AAGGQIIELS PC