Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01770 |
Symbol | |
ID | 6776051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1904900 |
End bp | 1907491 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642755206 |
Product | predicted extracellular nuclease |
Protein accession | YP_002126068 |
Protein GI | 196156579 |
COG category | [R] General function prediction only |
COG ID | [COG2374] Predicted extracellular nuclease |
TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.609758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAT CATTAACTTT ACTATCTGCA GGGATAATTT CTGCGCTTTC TTCCACAGCA GTTAATGCTA ACGATTTGGT CATTAGTGGT GTCATTGATG GGCCGCTAAG TGGCGGTGTA CCCAAAGCCG TTGAACTTTT TGTGGTCAAC GACATTGCCG ACTTGTCCGC TTATGGTGTT GGCTCTGCCA ATAATGGTGG TGGCACAGAT GGCGAAGAGT TCACCTTCCC AACTGGCGTA TCTGCAAGTG CGGGAACCTA TATTTACGTT GCATCTGAAA TAGACGGCTT TACCGCGTTT TTCGGTTCAG CACCTGACTA TGATAGCTCG TCAATGGGCA TTAATGGCGA CGATGCTATT GAACTTTTCA AAGACGGTAG TGTTATTGAT ACGTTTGGCG ACATTAATAC CGATGGAAAC GGCACCGCGT GGGAATACCT TGATGGGTGG GCTTACCGTA CCTCAGGCCA AAACGCTAAC GGCGGCAACT TCGATTCAGC TAACTGGACA TTCAGCGGTG TGGATGCGTT AGATGGCGCA ACAACAAATA CCGATGCAAC GACACCTTTC CCAACAGGTA CTTTCACAAC TGAAGGTGGA GATGAAGTAG TCGATGAACC TGAAGTACCG GCCGTTGAGC TAGGGGTTTG TGGCGATGAC GCGGTGCTTA TCAGTACTAT TCAAGGTAGT GAGAATAGCT CTGCAGAGGT GGGCAATAAG GTTATTGTAG AAGCTATCGT AACAGGTACG CGAGATGGCG GATTCTTTAT CCAAGAAGAA ACGGCAGATT ACGACGCTAA TGAAGCAACG TCTGAAGGCC TGTTGGTAGA AGGTAATATA GACATTGAAG TAGGCAACCT GGTTCGTCTT TACGGAGAAG TTGAAGAAAA TTACGGCATG ACCACGCTGG TTATGGACAG CGCTGTGGTA GCGTTAGATT GTGGCGAAGC GGAATCGGTT GCGAGCGTAG CCCTTTCAAT GCCTTATGAA GTTGACTTAG AAACACTGGA AGGCATGGTA GTAAGCGTTA CCGATGCTAC CGTAATAAGC ACGAATAACT TGTGGCGCTT CGGTGAGATT GTCGTTAGTG ACACGATTAA GCGTCAGCCG AGCGACGTTG CAGCTCCACT GTCAGAAGAC TACGTTGCAG CAGAGCAAGC AAGCGAAACC AGCTTACTCA CTATTGAAGA CAATAGTGGC TCACAATATC CTGATACACT TAATTACTTC CCTACTTTCA GCTATGCGAA CGCCATTCGC ATTGGCGACA GTGTGTCGGC CTCGGGCCCG CTAAACTATA GCTTTGGTAC TTACAGAATA AATCCAAGTG ACATCATTGA AGTAGCTTCA ACACGCGAAG CCAACCCTGT TGTTGCTGAA GGTAACCTTT CAATCGCGAC GTTTAACGTA CTGAACTATT TCAATGGCGA AGTAGATGAA AACGGCGATG TGACCTTTGA TTATGACAAC AATCGCGGTG CGTCAGACGA CGTGGCCTTC GCCCTACAAC AAGGCCGTAT TGTCGAAGCC ATTATTAATT TGAATGCTGA TGTTGTTGGC TTAATGGAGA TAGAGAATGA TGGCTTTGGC GACGATAGCG CTATCCAGTC TCTTGTTAAT GCCATTAATG CTGAATTAGG TGAAACCGAA CAATACGCAT TTGTTGCTAC CAGCGACGGT AGCGAAATAG GTACCGATGC CATTACCGTA GGCTTACTAT ATAAGGCGTC TGTAGTGACA CCTGAAAGCG ATGCAATGAT TGTGGATATG CCAGTACAAC AAATTGATGA AGATAGTCTG GCACGTATGC GCCCTAGCCT TCTTCAGTCG TTCGTTCATA ACGAAAGTAG CAAGTCGTTC CTTGTTGCGG TAAATCACTT TAAATCTAAA GGTTCGCAGT GTGCTGAGGA CGTAGCAGAA GCACCGTCTG AAATTACGAC AATTCAAGGC AGCTGTAATG CACTTCGCGT ATCGGCAGCG ATCACGCTTG GTAACGCATT GAGCGATGAG AGCCTGCCTG AGCGTAAGGT CATCTTGGGC GACTTAAATG CATACAGTGC TGAAGACCCT GTCGCTGTAC TTACCGATTA CACACCTGAA TCACGTGGAT ACACCATCGC TACTGCTATA AACACGGGCA TGGACGAAGG TGCTTCGGTT GACGTTGAAT CTAGCTTTGG CTATCACAAT TTAGCCGAAG AGTTCGACGC AGAAGGCTTT TCATATTGGT TCTACGGCAC TGAACAAGTG GGTAGTTTAG ATCACGTGTT AGCAAGTGAC GCCATGCTTG CAGACGCTAT TGATGGTGCG CACTGGAATA TTAACTCAGT GGAAGCGTAT CAGCTACAGT ACGATCAAGC GCTTCGTTTC TATCCTGAAG AAGAAGGCTA CGCATTTACC GACGTTGGCC CGTTTAGAAG CTCGGACCAT GACCCATTCA TCGCCACATT CGATTTACAA GCGGACGTAG TTGAAGACGA TGAAGATGAC AACAAGGATA GCTCAGGAGG AGCGATGGGA GGAATTTTCG CATTGCTAGC CGCAATGGTA GGTTTTCGCC GTCGTCAGCA TAATGTTGAA AAGAAAAGCT AA
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Protein sequence | MKTSLTLLSA GIISALSSTA VNANDLVISG VIDGPLSGGV PKAVELFVVN DIADLSAYGV GSANNGGGTD GEEFTFPTGV SASAGTYIYV ASEIDGFTAF FGSAPDYDSS SMGINGDDAI ELFKDGSVID TFGDINTDGN GTAWEYLDGW AYRTSGQNAN GGNFDSANWT FSGVDALDGA TTNTDATTPF PTGTFTTEGG DEVVDEPEVP AVELGVCGDD AVLISTIQGS ENSSAEVGNK VIVEAIVTGT RDGGFFIQEE TADYDANEAT SEGLLVEGNI DIEVGNLVRL YGEVEENYGM TTLVMDSAVV ALDCGEAESV ASVALSMPYE VDLETLEGMV VSVTDATVIS TNNLWRFGEI VVSDTIKRQP SDVAAPLSED YVAAEQASET SLLTIEDNSG SQYPDTLNYF PTFSYANAIR IGDSVSASGP LNYSFGTYRI NPSDIIEVAS TREANPVVAE GNLSIATFNV LNYFNGEVDE NGDVTFDYDN NRGASDDVAF ALQQGRIVEA IINLNADVVG LMEIENDGFG DDSAIQSLVN AINAELGETE QYAFVATSDG SEIGTDAITV GLLYKASVVT PESDAMIVDM PVQQIDEDSL ARMRPSLLQS FVHNESSKSF LVAVNHFKSK GSQCAEDVAE APSEITTIQG SCNALRVSAA ITLGNALSDE SLPERKVILG DLNAYSAEDP VAVLTDYTPE SRGYTIATAI NTGMDEGASV DVESSFGYHN LAEEFDAEGF SYWFYGTEQV GSLDHVLASD AMLADAIDGA HWNINSVEAY QLQYDQALRF YPEEEGYAFT DVGPFRSSDH DPFIATFDLQ ADVVEDDEDD NKDSSGGAMG GIFALLAAMV GFRRRQHNVE KKS
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