| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01759 |
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| Symbol | |
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| ID | 6775941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1890696 |
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| End bp | 1892192 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755195 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_002126057 |
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| Protein GI | 196156568 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.320518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAG AAATTTTGTT AGTGGCGGAA GCCGTTTCAA ATGAAAAACA AGTGCCTAGA
GAAAAGATTT TTGAAGCGCT AGAGTTTGCT ATTGCTAGCG CAACAAAAAA GAAAAACGAA
GGCGAAATTG AAGTTCGTGT AAGCATCGAC AGAACGTCTG GTGACTTTGA TACATTCCGT
CGCTGGTTGG TTATCCCTGA TGATCAAGAA CAGGAAAACC CATTTGCTGA AATTACGATT
TCTGCGGCGC AAATCGACGA ACCAGAGATA CAACTTGGCG ATTATGTGGA AGAACAGATT
GAATCTATCA AATTCGACCG CATAACTACG CAAACAGCTA AGCAAGTTAT CGTACAGAAA
GTACGTGAAG CTGAGCGTCA GCAGATGATT GCTGAGTACG AAGATAAAGT GGGTGAGTTG
GTAACAGGCA CGGTTAAGAA AGTTAACCGC GATAATATCA TCATCGATTT GGGTAACAAC
GCTGAAGGTG TTATCTACCG CGATGACATG CTTCCTCGTG AAACTTTCCG TCCTGGTGAC
CGTGTACGTG GTCTTCTTTA CGTAATTCGT CCAGAAGCGC GTGGCGCACA ACTATTTATC
AGCCGTACGC ATCCAGACAT GCTAGTTGAA CTATTCCGCT TAGAAGTGCC AGAAATCGCG
GAAGAAACAC TAGAAATTAA ATCTGCTGCT CGCGACCCGG GCTCTCGTGC AAAGATTGCT
GTTAAAACCA ACGATAAGCG TTTAGACCCT GTGGGTGCGT GTGTTGGTAT GCGTGGCTCA
CGTGTACAAG CTGTGTCGGG TGAACTGGGC GGCGAACGTG TTGATATCGT GCTTTGGGAT
GAAAACCCAG CGCAATTTGT TATCAATGCA ATGGCACCTG CTGAAGTAGC ATCAATTGTT
GTTGACGAAG ACAGCAATAA CATGGATGTA GCAGTTGAAG CCGATAATCT AGCGCAAGCG
ATTGGCCGTA GCGGTCAAAA CGTTCGCTTA GCAAGCCAGC TAACAGGCTG GGAACTTAAC
GTGATGACGG TTGAAGACCT CAACAAGAAG CACGAAGAAG AAAACGCGAA GGTACTGAAT
CTATTTACTG CTGGTTTGGA TATTGACGAA GAATTTGCGT CTGTCCTAGT AGATGAAGGC
TTTACGACAC TAGAAGAAGT GGCATACGTG CCGGCAAGTG AACTTCTAGC GGTTGAAGGG
TTAGATGAAG ATATGGTTGA AGAGTTGCGC AATAGAGCGC GCGCTTTCTT AACCACGCGT
GCACTAGCGA ACGAAGAGTC GCTTGAAGGT GCAGAACCTA CCGAAGCCTT ATTAAATCTT
GAGGGTATGA GTAAACACGT GGCTTATGTG TTGGCCAGCC GCGGTGTTAT CGACCTAGAG
GAATTAGCAG AACAAGGTAC CGATGATATC AGTGATATCG ATGAACTAGA CGAAGAGAAA
GCCGGTGAGT TAATCATGGC GGCTCGTAAT ATCGTATGGT TCAGTGAAGA AGAGTAA
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| Protein sequence | MNKEILLVAE AVSNEKQVPR EKIFEALEFA IASATKKKNE GEIEVRVSID RTSGDFDTFR
RWLVIPDDQE QENPFAEITI SAAQIDEPEI QLGDYVEEQI ESIKFDRITT QTAKQVIVQK
VREAERQQMI AEYEDKVGEL VTGTVKKVNR DNIIIDLGNN AEGVIYRDDM LPRETFRPGD
RVRGLLYVIR PEARGAQLFI SRTHPDMLVE LFRLEVPEIA EETLEIKSAA RDPGSRAKIA
VKTNDKRLDP VGACVGMRGS RVQAVSGELG GERVDIVLWD ENPAQFVINA MAPAEVASIV
VDEDSNNMDV AVEADNLAQA IGRSGQNVRL ASQLTGWELN VMTVEDLNKK HEEENAKVLN
LFTAGLDIDE EFASVLVDEG FTTLEEVAYV PASELLAVEG LDEDMVEELR NRARAFLTTR
ALANEESLEG AEPTEALLNL EGMSKHVAYV LASRGVIDLE ELAEQGTDDI SDIDELDEEK
AGELIMAARN IVWFSEEE
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