| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01735 |
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| Symbol | |
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| ID | 6775463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1861027 |
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| End bp | 1864134 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642755168 |
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| Product | RND family efflux transporter |
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| Protein accession | YP_002126033 |
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| Protein GI | 196156544 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTGT CAGATGTATC TGTAAAGCGC CCGGTTTTCG CAACCGTTAT AAACTTGCTG
CTCATTATCT TTGGTGTTGT CGCTTTTTCC ATGTTGAGTC TGCGAGAATA CCCAGACATA
GACCCTCCTA TCGTTTCTGT AAGTACAACC TATACAGGGG CGTCGGCCAA TATTGTTGAA
ACCCGTATTA CGCAGCTGTT GGAAGACAGA ATTTCGGGCA TTGAAGGCAT TAAAAATGTC
ACGTCTACGT CTCGAAATGG CCGCTCAGAC ATTACCATTG AGTTCAAGCT TTCAAGAGAC
ATAGACGCGG CAGCCAATGA TGTACGCGAA CGCGTTAGCC GGGCATTGAA CAACTTACCG
GATCAGGCCG ATCCACCTGA AGTATCAAAA GCTAACTCTG ATGAAAGTGC GGTGGTGTGG
TACAACCTTC GCAGCACCAA CTTAAATACA ATGGAGCTAA CCGATTACGC CGAGCGCGTG
TTAGTGGACA GGTTATCAAT TGTAGACGGC GTTGCTCGCG TGCAAATTGG TGGTGGTAGA
CGCTATGCCA TGAAGGTATT TCTAGACCGT AACGCAATGG CGGCGCGCGG TATTACGGTA
AGTGATGTTG AACAAGTTAT TCGTGCAGAA AACGTAGAGT TGCCGGCAGG AGAGGTGGAA
AGTACTGACA GAAACTTTGA AGTGCGGGTG GCAAGAACTT TTCTTTCTCC TGATGATTTT
TCAGCCCTTA CCGTGGCGGT AGGCGATAAC GGTTACTTGG TTCGCCTTGG TGAAATTGCC
CACGTTGAGT TGACCGCTGA AGATGATGAA ACCGAGTTTC GCGGCGATGG TGTGAATATG
ATAGGGCTGG GTATTATTAA GCAGTCTAAA GCTAATACCC TTGATGTAGC GCGAGCGGCA
AAAGCGCAAA TAGCCAAAAT AGAAGCCACG CTTCCCGATA ATATTTTTAT TGTGCCAAGC
TACGATTCGT CTGTGTTCAT CGAAGCATCC ATTGACGAAG TGTACGAAAC CTTAGGTATT
GCCATGTTAA TGGTGGTTAT CGTTATCTAT CTATTCTTAG GTAATATTCG TGCTACGTTA
ATTCCCGCCG TAACGGTACC CGTTTCCATC ATTGCAGCGT TTATCGTGAT GTATGCGCTG
GGGTTCTCTA TCAACCTACT TACTCTACTT GCTATGGTGC TCGCGATTGG ACTGGTGGTT
GATGATGCTA TCGTAGTACT AGAGAACATT TACCGACGCA TCGAAATGGG CGAGCCGCCT
ATTTTGGCAG CGTACCGCGG CGCTAAAGAA GTGGGGTTTG CGGTTATTGC TACCACTCTT
GTACTGATTT CAGTGTTCGT ACCTTTAGTA TTTTTAGAAG GTAACATAGG CAGGTTATTT
ACCGAATTTG CCCTAGCCAT TGCGGCGGCT GTGGCATTTT CAAGCTTTAC TGCCCTTACA
CTCTCGCCCA TGATGGCATC GAAGATCCTT AAAAAGCGCA CTCGCTCTTC AGGCTTTGGA
AGCTGGATGG ATAAGCGCTT CTCGCAGTTG GAAAATGGCT ATTTCACTGC GCTGGGTAAA
ACCTTACACC AGCCTATTTT AATGCTGCTT TTGTTGGTGA TTACGGTTGT TGCGCTGGTG
CAGCTATCTG AGAAAGTGCC CAGTGAATTT GTGCCTAAAG AAGACAGGGG CAATTTCTTT
ATCTTGATGA ATGCACAGGA AGGGGCAAGC TTTGAAAGTA ACGCCAAAAA CCTGGAGAAG
ATTGAAAGCA TATTAATGCC TTACCGAGAA AGCGGAAAGA TAAACCGCCT GTTAGTTCGC
ACCCCTGGTT TCGGGGGCAA TGCGGGTATT GCCATAGTTG GCTCCGCAGA TTGGGACGAA
CGCGACTTTA GTACGTTTTC TCTCATGGAT GAAATTAGCG CTAAACTAAA TTCTGTGCCT
GATGTACGCG CCTTCGCAAT CATGCGAAGT GGGATTTCAG GGGGAGGTTT AGGCCGTCCA
GTACAGTTCG TATTACAGGG CGATACCTAT GAAAACCTGG TTGAATGGCG AGATATAGTG
CTTGAGAAGG CAGCGCAAAA CCCTGGCTTG GTTCGCATAG ATTCTGATTA TAAAGAAACC
TCTCCTCAAC TGCTGGTGAA TATTAACCGC GATAGGGCTG CAGATCTTGG CGTGTCTATT
AGCGATATTG GCGGCACATT AGAAGTGATG TTAGGGCAGC GCCGCGTGTC TACTTTCCTT
GATAGGGGAG AGGAGTACGA TGTAATTTTA GAAGGCATAG AAGAAGATTT CAGAAGCCCT
AATAGTATAG AAAACTTGTA TGTACGCTCA GCAAGAACCG GTGAATTAAT TCCGATGGAT
AACTTGCTAA CGTTTGAAGA GCAGGCCACA TCCTCAAGGC TTAATCGCTA CAATAGAATG
CGGGCAGTCA CTATTTCAGC AAACTTGGCA GAGGGATACA CATTAGGTGA GGCACTAGCC
TATCTTGAAA ACATTGTCGC TACCGAATTG CCAGATAATG TGTCGATTGA CTACAAAGGC
GAATCTCAGC TTTACCAAGA GGCAGGGAAT TCATTTATTT ATGTATTCAT GCTGGCGCTT
GCCGTTACCT ATCTCATATT AGCTGCTCAG TTCGAGAGTT GGGTACATCC GTTAGTGATC
ATGCTAACGG TACCGCTAGC CTTAGTGGGG GCTTATATTG GGCTGTTTTT CAGCGGCATG
ACGATTAATA TCTACAGTCA AATTGGGCTT GTAATGCTAA TTGGCTTGGC GGCTAAAAAC
GGCATACTCA TTGTTGAGTT TGCAAATCAG CTGCGGGACG CCGGCATGGA ATTCGAACAT
GCACTAAAAC GGGCTGCCGC CCAGCGTTTG CGACCTATTG TCATGACCGG TTTTACCACT
GTTTTTAGCG CTTTGCCTCT GGTGCTTGCC TCAGGCCCCG GCGCTGAAAG TCGTATGGTA
ATTGGTATGG TCATTTTTTC AGGTGTCTTA GTGTCGGCCT TTATGACGTT GTTTGTTGTT
CCTACGGCCT ACAGCTGGCT GGCGCGCGAC ACAGGATCGC CGCTTAAGCG AACCAATGAA
ATAGAACGAT TAGAAAAAAC GATCCCGTAT AAAAAAGGGG AAGATTAA
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| Protein sequence | MLLSDVSVKR PVFATVINLL LIIFGVVAFS MLSLREYPDI DPPIVSVSTT YTGASANIVE
TRITQLLEDR ISGIEGIKNV TSTSRNGRSD ITIEFKLSRD IDAAANDVRE RVSRALNNLP
DQADPPEVSK ANSDESAVVW YNLRSTNLNT MELTDYAERV LVDRLSIVDG VARVQIGGGR
RYAMKVFLDR NAMAARGITV SDVEQVIRAE NVELPAGEVE STDRNFEVRV ARTFLSPDDF
SALTVAVGDN GYLVRLGEIA HVELTAEDDE TEFRGDGVNM IGLGIIKQSK ANTLDVARAA
KAQIAKIEAT LPDNIFIVPS YDSSVFIEAS IDEVYETLGI AMLMVVIVIY LFLGNIRATL
IPAVTVPVSI IAAFIVMYAL GFSINLLTLL AMVLAIGLVV DDAIVVLENI YRRIEMGEPP
ILAAYRGAKE VGFAVIATTL VLISVFVPLV FLEGNIGRLF TEFALAIAAA VAFSSFTALT
LSPMMASKIL KKRTRSSGFG SWMDKRFSQL ENGYFTALGK TLHQPILMLL LLVITVVALV
QLSEKVPSEF VPKEDRGNFF ILMNAQEGAS FESNAKNLEK IESILMPYRE SGKINRLLVR
TPGFGGNAGI AIVGSADWDE RDFSTFSLMD EISAKLNSVP DVRAFAIMRS GISGGGLGRP
VQFVLQGDTY ENLVEWRDIV LEKAAQNPGL VRIDSDYKET SPQLLVNINR DRAADLGVSI
SDIGGTLEVM LGQRRVSTFL DRGEEYDVIL EGIEEDFRSP NSIENLYVRS ARTGELIPMD
NLLTFEEQAT SSRLNRYNRM RAVTISANLA EGYTLGEALA YLENIVATEL PDNVSIDYKG
ESQLYQEAGN SFIYVFMLAL AVTYLILAAQ FESWVHPLVI MLTVPLALVG AYIGLFFSGM
TINIYSQIGL VMLIGLAAKN GILIVEFANQ LRDAGMEFEH ALKRAAAQRL RPIVMTGFTT
VFSALPLVLA SGPGAESRMV IGMVIFSGVL VSAFMTLFVV PTAYSWLARD TGSPLKRTNE
IERLEKTIPY KKGED
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