| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01713 |
|---|
| Symbol | |
|---|
| ID | 6775633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 1838408 |
|---|
| End bp | 1839589 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642755146 |
|---|
| Product | chorismate mutase/prephenate dehydratase |
|---|
| Protein accession | YP_002126011 |
|---|
| Protein GI | 196156522 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01797] chorismate mutase domain of proteobacterial P-protein, clade 1
[TIGR01806] chorismate mutase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.342812 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACA ATGCACTAGA TACTGTTAGA GAGCGAATTA CCGCACTAGA CAGTGAGTTA
CTTACCTTAC TTTCAGAACG CAGAAAGCTA ACTAATGAAG TCGCTGAGAC AAAAATTAGA
CATCACATTC CTGTGAGAGA TCAAAAGCGC GAAGAGCAGC TCTTAGTACG ACTGATAAAA
GAAGGTCAAG ATATTGGACT AGACCCCCAT TACGTGACTC AAATTTTCCA TGTCATTATT
GAAGACTCGG TGTTAAACCA ACAGGCAATG CTTGCTGAAC GCGCAAATCC TGGTAGCACG
CTTCCGTTAA ACCGTGTGGC GTTTTTGGGT GACAAAGGCT CGTACTCTTA CCTTGCAACA
CAGAAGTACT TCTCACGTCG CCCTGGCGAG CTGTTAGAAA TTGGCTGTCA GAGTTTCGCC
GAAATCATTC ATAAAGTGGA AAGCACAGAA GCTGACTATG CGGTACTACC AATTGAAAAT
ACGACTTCTG GCAGTATCAA CGAAGTATAC GACCAGCTTC AGCACACCCA ATTAAGTATT
ATTGGCGAGC TCACTCACCC CATCCGTCAT ACTCTTTTAG TGGGAAGTGA TACCAGCATA
GATAAAATTA AAACGCTGTA CGCCCACCCT CAAGTTTTTA CTCAGTGCAG CCATTTCCTT
GCGGAGCTAG GCAATGTAGA AGTAAAAACT ATGGACAGCA CGTCATCTGC CATGTTGACC
GTGAGCGAGC TCAAACGGGA CGATGTGGCA GCAATAGGCA GTGAAGCTGG CGGTAACTTA
TATGGCTTGA TGGCAATTAA GAGTAATTTA GCTAATCAAA AAGAAAACCA CAGTCGCTTT
ATTGTCGTTG CGCGCAACCC TGTTGTGGTA CCACTTCAAG TGCCGGCCAA GACCACCCTT
GTGATGTCGA CCATTCAAAA ACCTGGGGCG CTGGTTGAAG CACTGCTAGT GCTAAGAGAA
AACAGTATTA ACATGACTAA GCTAGAGTCA CGCCCTATTC CGGGTAACCC ATGGGAAGAA
ATGTTTTATA TTGATGTTGA GGGCAACGTA GAGGACGGCC CCGTCCAAAA TGCGCTAGAC
TCACTACGTG GCATAACGCG CTACATCAAA GTACTTGGAT GCTACCCAAG TGAAGAAATT
AGCCCGACTA AAGTAGCTGC GGCAAGTGCA TTAGCTGACT AG
|
|---|
| Protein sequence | MSDNALDTVR ERITALDSEL LTLLSERRKL TNEVAETKIR HHIPVRDQKR EEQLLVRLIK
EGQDIGLDPH YVTQIFHVII EDSVLNQQAM LAERANPGST LPLNRVAFLG DKGSYSYLAT
QKYFSRRPGE LLEIGCQSFA EIIHKVESTE ADYAVLPIEN TTSGSINEVY DQLQHTQLSI
IGELTHPIRH TLLVGSDTSI DKIKTLYAHP QVFTQCSHFL AELGNVEVKT MDSTSSAMLT
VSELKRDDVA AIGSEAGGNL YGLMAIKSNL ANQKENHSRF IVVARNPVVV PLQVPAKTTL
VMSTIQKPGA LVEALLVLRE NSINMTKLES RPIPGNPWEE MFYIDVEGNV EDGPVQNALD
SLRGITRYIK VLGCYPSEEI SPTKVAAASA LAD
|
|---|
| |