Gene MADE_01711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01711 
Symbol 
ID6776258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp1836062 
End bp1837150 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content45% 
IMG OID642755144 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_002126009 
Protein GI196156520 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.128695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAGG ACACCGTAAA TAATGTTCAC GTAAGTACAG AAGATGTACT TATTACCCCA 
GAAGCGTTAA GCGCTGAACT GCCTGTTTCA GACAAAGCGC TCGCCGCCAT TTCTGATTCA 
AGAAAAATCG TTTCAGATAT TATTCATCGC CGCGACCATA GAATGCTAGT TGTGTGTGGT 
CCATGCTCCA TTCACGATGT AGAAGCTGCG AAAGAATACG CGCTTAAGCT GAAAGAACTT 
CACGAGTCAT GCAAAGATAC ACTCTTTCTT GTAATGCGCG TTTATTTTGA AAAACCGCGC 
ACTACTACAG GTTGGAAAGG CCTAATAAAT GACCCCCACA TCGACGGTAC GTTTGATATT 
GAAACGGGCT TACGTAAAGC AAGAGAACTA CTGATTTGGC TAGCAGAGCT AGAGCTGCCT 
GTTGCAACCG AGGCGCTAGA CCCAATTAGC CCACAGTATC TGGCAGAGTT ATTTAGCTGG 
GCGGCTATCG GAGCGCGTAC ATCTGAATCT CAAACTCACC GTGAAATGGC AAGTGGTCTT 
TCTATGCCAG TGGGTTTCAA AAATGGTACA GATGGAAGTT TAGATATTGC GATTAATGCC 
CTTAAATCGG CCGCATCTGG CCATCGCTTT ATGGGTATTA ATAAGCAAGG TCAGGTAAGC 
ATTATTGGGA CCAGCGGTAA CCCAGACGGC CATATTATCC TTCGTGGTGG TAAGCAGCCT 
AACTATGACT CTGTGTGCGT GTCTGAGTGC GAAATTGAAC TACAAGATGC GGGCCTAACC 
GCGGGCTTGG TTGTTGATTG CAGCCATGCT AACTCGTCTA AAGATTATCG CCGTCAGCCG 
TTAGTTGCGC AAAACGTGGT GAACCAAATT CTTGAAGGCA ATCAGTCTAT CATTGGCGTT 
ATGCTAGAAA GCCACTTAAA GCCTGGTAAT CAAAAAGCAG AAGGCAAAAA GCCTGAAGAA 
CTAGAATACG GGGTTTCGAT TACAGATGGT TGTATCGACT GGCAAACCAC AGAAAACTTA 
ATTACTCAAA CCAGAGATAA ATTAATAACT GTGCTACCCT TACGTCAAAA TAAGCGCACG 
GTGGCTTAA
 
Protein sequence
MIKDTVNNVH VSTEDVLITP EALSAELPVS DKALAAISDS RKIVSDIIHR RDHRMLVVCG 
PCSIHDVEAA KEYALKLKEL HESCKDTLFL VMRVYFEKPR TTTGWKGLIN DPHIDGTFDI 
ETGLRKAREL LIWLAELELP VATEALDPIS PQYLAELFSW AAIGARTSES QTHREMASGL 
SMPVGFKNGT DGSLDIAINA LKSAASGHRF MGINKQGQVS IIGTSGNPDG HIILRGGKQP 
NYDSVCVSEC EIELQDAGLT AGLVVDCSHA NSSKDYRRQP LVAQNVVNQI LEGNQSIIGV 
MLESHLKPGN QKAEGKKPEE LEYGVSITDG CIDWQTTENL ITQTRDKLIT VLPLRQNKRT 
VA